The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028389

Identifier: 238028389

GI number: 238028389

Start: 3232602

End: 3234584

Strand: Direct

Name: 238028389

Synonym: bglu_1g28500

Alternate gene names: NA

Gene position: 3232602-3234584 (Clockwise)

Preceding gene: 238028380

Following gene: 238028390

Centisome position: 82.75

GC content: 59.71

Gene sequence:

>1983_bases
ATGAGCCACTTTGACGAGCTACCGCGTCGTGACGGTAATCACGAGATCGAAGACGAGGCGATTGCCGCCTTCCAGATGCG
GCTCACCGATAGTGGCGCTTTCATCCTTCAGGCGCAGGACCGCAAGGACTACGGAACGGACTGTCAGATCGAGGTGGTGG
CTGATGGGCATGCCACCAACGCCCGGGTACACGTCCAGCTAAAGGGCACTGAGAGTGCGTTGAACGCTGACGGCTCGCTC
AGTGTCGAAGTTCGCCGCACGAACCTCAACTATCTGCTTATGCAGCCCTATAGCGTTTACGTTGCCTATCACGCACCGAC
AGGTTCCTTACGCATTCGCACGGCAGAAAGTGTTGCCCGTCAATATGAGCATAGCGGGAAAAACTGGACCGACCAGCGGT
CGCTGACTGTCTCTTTCGTTGAGGAGCTGTCGATTGAGCGCCTTGGCCGGCTCGCGGCTCTTGCCCGTGCCGGGGCAAAG
TCATCACGCGATCGGCGCGTAGGCCAAGTCGGGGTGGCCGCCGCCGACCTATCCAATCACGTTCTGGGGTCGCCGCGTGA
TATTCACGTTCCCCAGGAGACTGCCCTGGCGCGCGAGCTTCTCGTACAACTCTACGAGAAGAACGCCGACGAGGAGATTA
GCGCCGGCTTCGCCAAGTTCGCGGCCGTTTTCGGCGTTGGCAGTGACGAAATGGGCGTTTGCTACATGGCCGAAATCAAC
CTCGGCATGGATGGCATGAGCCGGCACCCAGAGAGGATCGAGGAAGCCATCAGTTTTTTTCGGATCAGGCTTGCAGATGA
TCGTTATCAAATCGGCGACCTGCACTACACGATCGGAAACGCCTTCCATGCTCTCGGTAACGAGCAAGAAGCAAAGCGAG
CTTTCGAAGCCGCGCTCGCCGATCCTGCGCTCGCTGCCACTTCCGAACTAGCAGCTCAGATCCACAAAAACCTCGGCTCC
AGTTGCGCCGTGCTTGGCGACGACGGGCAGGCGGTGGCTCACTACCGCGAAGCTTTGCGGTTGAATCCCGATCTTGCGGA
GGCCCACAACTCCCTGGGCACCCACTACGTTCGTTTGGGCAAGTACGAGGACGCTTTGCGTCATCTCGACCAAGTCGTCT
TCTCGGATCAAAAGCAGGGCAGGACTTCTGCGGTCGTCGGCTGGCGCGTCAACGTTCTTTTCAATCTCGGCGACGGCCGT
GCTGCGTTTCGCGAGATCAACGGCCTGGTAGCTCAGGCTGACCGCTTCCGTTGGATTTGGCCGTGGTGTTCCCGTCTGGT
CACGGCCTTCGGACGCGCGAATGTGGACAACGCCCGTCAGGCGTTGCCCTTCTGGCAACGCTACGTGAGGGCGAACCCTG
AGGATCCCGCCGGAAATTGGGAACTTCTCATGACGACGTTCTATCTGCGCGGCCGAGGAGAGGATGTCTCGAAAACCTAT
AGTGAATTCCGCGAGGAATTCGATAGGCACATCGCCCACATCGACCCCGACGATGCCGCGCTGCCTTGGGATCGTCTGGG
CCACTGGGCGCAGGACGACCAAGACTGGGCGGAGGCGGAGCGCTGCTTTCGCAAGGCGTATGAATTGGCGGGCGGCGAAT
ACGGCTATTGCATGGCGATTGCCCTCATGGAATTGGGGAGGTTCGATGAGAGCGTGCCGCTCCTGCTGGAACAGGCTCAG
ACCATTCAACCGGATGCCAAGAGCTGGTTTCAGCTGGCTGCAGCTTACGCCTCCCTTAGCAGGTGGTCAGAGGCGATTGA
CGCCTACGAGAGGACGCTTGGGCTCGACCCAGACGATGCTGTGGCGATGTTCGACCTTGGCGGCGCCCACTGGAATAGTG
GCGATGCAGCGACGGCGCTGGACATTTGGACGGCTGCGATAGAACGTTTCCCTACCCATGAACTCAGCGCCAAGCTTGAG
CGCGATTTCCCGTCGTTGTTTAGTGATCCGGATACCGGCCAACCCGCCGATGGCACTCGGTAG

Upstream 100 bases:

>100_bases
GAAAGTCTTGGTGGCGCCAACGCTCAAGTTCGTGCGGTCGACGTCGTAGGTATCGTCTATAGCAACCGGAACCACCGAAC
GCCCGCATCAAGCCAACGCT

Downstream 100 bases:

>100_bases
AGGTTCGGGTCTGTCCCAGCGACCGACCGGAAGGCAATCGGCCACCAATCAAATGCGCCTGTCCAAAACCGATCCCTTGC
GGACAGGGGCATTTTGCCCT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 660; Mature: 659

Protein sequence:

>660_residues
MSHFDELPRRDGNHEIEDEAIAAFQMRLTDSGAFILQAQDRKDYGTDCQIEVVADGHATNARVHVQLKGTESALNADGSL
SVEVRRTNLNYLLMQPYSVYVAYHAPTGSLRIRTAESVARQYEHSGKNWTDQRSLTVSFVEELSIERLGRLAALARAGAK
SSRDRRVGQVGVAAADLSNHVLGSPRDIHVPQETALARELLVQLYEKNADEEISAGFAKFAAVFGVGSDEMGVCYMAEIN
LGMDGMSRHPERIEEAISFFRIRLADDRYQIGDLHYTIGNAFHALGNEQEAKRAFEAALADPALAATSELAAQIHKNLGS
SCAVLGDDGQAVAHYREALRLNPDLAEAHNSLGTHYVRLGKYEDALRHLDQVVFSDQKQGRTSAVVGWRVNVLFNLGDGR
AAFREINGLVAQADRFRWIWPWCSRLVTAFGRANVDNARQALPFWQRYVRANPEDPAGNWELLMTTFYLRGRGEDVSKTY
SEFREEFDRHIAHIDPDDAALPWDRLGHWAQDDQDWAEAERCFRKAYELAGGEYGYCMAIALMELGRFDESVPLLLEQAQ
TIQPDAKSWFQLAAAYASLSRWSEAIDAYERTLGLDPDDAVAMFDLGGAHWNSGDAATALDIWTAAIERFPTHELSAKLE
RDFPSLFSDPDTGQPADGTR

Sequences:

>Translated_660_residues
MSHFDELPRRDGNHEIEDEAIAAFQMRLTDSGAFILQAQDRKDYGTDCQIEVVADGHATNARVHVQLKGTESALNADGSL
SVEVRRTNLNYLLMQPYSVYVAYHAPTGSLRIRTAESVARQYEHSGKNWTDQRSLTVSFVEELSIERLGRLAALARAGAK
SSRDRRVGQVGVAAADLSNHVLGSPRDIHVPQETALARELLVQLYEKNADEEISAGFAKFAAVFGVGSDEMGVCYMAEIN
LGMDGMSRHPERIEEAISFFRIRLADDRYQIGDLHYTIGNAFHALGNEQEAKRAFEAALADPALAATSELAAQIHKNLGS
SCAVLGDDGQAVAHYREALRLNPDLAEAHNSLGTHYVRLGKYEDALRHLDQVVFSDQKQGRTSAVVGWRVNVLFNLGDGR
AAFREINGLVAQADRFRWIWPWCSRLVTAFGRANVDNARQALPFWQRYVRANPEDPAGNWELLMTTFYLRGRGEDVSKTY
SEFREEFDRHIAHIDPDDAALPWDRLGHWAQDDQDWAEAERCFRKAYELAGGEYGYCMAIALMELGRFDESVPLLLEQAQ
TIQPDAKSWFQLAAAYASLSRWSEAIDAYERTLGLDPDDAVAMFDLGGAHWNSGDAATALDIWTAAIERFPTHELSAKLE
RDFPSLFSDPDTGQPADGTR
>Mature_659_residues
SHFDELPRRDGNHEIEDEAIAAFQMRLTDSGAFILQAQDRKDYGTDCQIEVVADGHATNARVHVQLKGTESALNADGSLS
VEVRRTNLNYLLMQPYSVYVAYHAPTGSLRIRTAESVARQYEHSGKNWTDQRSLTVSFVEELSIERLGRLAALARAGAKS
SRDRRVGQVGVAAADLSNHVLGSPRDIHVPQETALARELLVQLYEKNADEEISAGFAKFAAVFGVGSDEMGVCYMAEINL
GMDGMSRHPERIEEAISFFRIRLADDRYQIGDLHYTIGNAFHALGNEQEAKRAFEAALADPALAATSELAAQIHKNLGSS
CAVLGDDGQAVAHYREALRLNPDLAEAHNSLGTHYVRLGKYEDALRHLDQVVFSDQKQGRTSAVVGWRVNVLFNLGDGRA
AFREINGLVAQADRFRWIWPWCSRLVTAFGRANVDNARQALPFWQRYVRANPEDPAGNWELLMTTFYLRGRGEDVSKTYS
EFREEFDRHIAHIDPDDAALPWDRLGHWAQDDQDWAEAERCFRKAYELAGGEYGYCMAIALMELGRFDESVPLLLEQAQT
IQPDAKSWFQLAAAYASLSRWSEAIDAYERTLGLDPDDAVAMFDLGGAHWNSGDAATALDIWTAAIERFPTHELSAKLER
DFPSLFSDPDTGQPADGTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73575; Mature: 73444

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFDELPRRDGNHEIEDEAIAAFQMRLTDSGAFILQAQDRKDYGTDCQIEVVADGHATN
CCCHHHCCCCCCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCC
ARVHVQLKGTESALNADGSLSVEVRRTNLNYLLMQPYSVYVAYHAPTGSLRIRTAESVAR
CEEEEEEECCHHHCCCCCCEEEEEEECCCCEEEECCEEEEEEEECCCCCEEEEEHHHHHH
QYEHSGKNWTDQRSLTVSFVEELSIERLGRLAALARAGAKSSRDRRVGQVGVAAADLSNH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEHHHHHHC
VLGSPRDIHVPQETALARELLVQLYEKNADEEISAGFAKFAAVFGVGSDEMGVCYMAEIN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
LGMDGMSRHPERIEEAISFFRIRLADDRYQIGDLHYTIGNAFHALGNEQEAKRAFEAALA
CCCCCCCCCHHHHHHHHHHHEEEECCCCEEECCEEEHHHHHHHHCCCHHHHHHHHHHHHC
DPALAATSELAAQIHKNLGSSCAVLGDDGQAVAHYREALRLNPDLAEAHNSLGTHYVRLG
CCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEC
KYEDALRHLDQVVFSDQKQGRTSAVVGWRVNVLFNLGDGRAAFREINGLVAQADRFRWIW
CHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEH
PWCSRLVTAFGRANVDNARQALPFWQRYVRANPEDPAGNWELLMTTFYLRGRGEDVSKTY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHEECCCCCHHHHHH
SEFREEFDRHIAHIDPDDAALPWDRLGHWAQDDQDWAEAERCFRKAYELAGGEYGYCMAI
HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALMELGRFDESVPLLLEQAQTIQPDAKSWFQLAAAYASLSRWSEAIDAYERTLGLDPDDA
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VAMFDLGGAHWNSGDAATALDIWTAAIERFPTHELSAKLERDFPSLFSDPDTGQPADGTR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHFDELPRRDGNHEIEDEAIAAFQMRLTDSGAFILQAQDRKDYGTDCQIEVVADGHATN
CCHHHCCCCCCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCC
ARVHVQLKGTESALNADGSLSVEVRRTNLNYLLMQPYSVYVAYHAPTGSLRIRTAESVAR
CEEEEEEECCHHHCCCCCCEEEEEEECCCCEEEECCEEEEEEEECCCCCEEEEEHHHHHH
QYEHSGKNWTDQRSLTVSFVEELSIERLGRLAALARAGAKSSRDRRVGQVGVAAADLSNH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCEEHHHHHHC
VLGSPRDIHVPQETALARELLVQLYEKNADEEISAGFAKFAAVFGVGSDEMGVCYMAEIN
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
LGMDGMSRHPERIEEAISFFRIRLADDRYQIGDLHYTIGNAFHALGNEQEAKRAFEAALA
CCCCCCCCCHHHHHHHHHHHEEEECCCCEEECCEEEHHHHHHHHCCCHHHHHHHHHHHHC
DPALAATSELAAQIHKNLGSSCAVLGDDGQAVAHYREALRLNPDLAEAHNSLGTHYVRLG
CCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEC
KYEDALRHLDQVVFSDQKQGRTSAVVGWRVNVLFNLGDGRAAFREINGLVAQADRFRWIW
CHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEH
PWCSRLVTAFGRANVDNARQALPFWQRYVRANPEDPAGNWELLMTTFYLRGRGEDVSKTY
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHEECCCCCHHHHHH
SEFREEFDRHIAHIDPDDAALPWDRLGHWAQDDQDWAEAERCFRKAYELAGGEYGYCMAI
HHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
ALMELGRFDESVPLLLEQAQTIQPDAKSWFQLAAAYASLSRWSEAIDAYERTLGLDPDDA
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VAMFDLGGAHWNSGDAATALDIWTAAIERFPTHELSAKLERDFPSLFSDPDTGQPADGTR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA