Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028363
Identifier: 238028363
GI number: 238028363
Start: 3204887
End: 3205348
Strand: Direct
Name: 238028363
Synonym: bglu_1g28240
Alternate gene names: NA
Gene position: 3204887-3205348 (Clockwise)
Preceding gene: 238028362
Following gene: 238028364
Centisome position: 82.04
GC content: 66.67
Gene sequence:
>462_bases ATGCAATTCTGGCTGATGAAATCCGAACCGGACGAGGCGAGCATCGACGATCTCGCCGCCGCGCCGCAACGCACGCTGCC ATGGACCGGCGTGCGCAACTATCAGGCACGCAACTTCATGCGCGACACGATGCGTGTCGGCGACGGCGTGCTGTTCTACC ACTCCAGCTGTCCGGAGCCGGGCATCGCCGGGCTGGCCGAAGTCGCGTCCACACCGTATCCCGACCCCACCCAGTTCGAC GCGGACAGCCCGTACTACGACCCGAAATCGAAACAGGACGCGCCGCGCTGGGTGCTGGTGGACGTGCGCTTCGTGAAGAA GACCGCGCTGGTGCCGCTCGCCGCGCTGCGCGAGCACGACGCGCTTGCCGAGATGCGCGTGCTCGCCAAGGGCAACCGGC TCTCGATCACGCCGGTCACGCGCGCCGAATGGCGCTTCATCACCGAGCGGCTGATGAAGTGA
Upstream 100 bases:
>100_bases CGGACCTTGTCCGATGCCGTTTTTCATTGGCACCGCCGCCTGGCCGCGGTGCGCGGCGCACGGCCTGCCGCCCCCCTGTT CCCTGTCGCGCGGAGCATCC
Downstream 100 bases:
>100_bases GACCCGCGCCGCCGCGCCGCTCGCCGGGCCGGCCCGGATCGGCCCGCTGGCGGGCGCCGCGCCGGAACTCGGCGCATCTT TCGTCGGCCTAATGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MQFWLMKSEPDEASIDDLAAAPQRTLPWTGVRNYQARNFMRDTMRVGDGVLFYHSSCPEPGIAGLAEVASTPYPDPTQFD ADSPYYDPKSKQDAPRWVLVDVRFVKKTALVPLAALREHDALAEMRVLAKGNRLSITPVTRAEWRFITERLMK
Sequences:
>Translated_153_residues MQFWLMKSEPDEASIDDLAAAPQRTLPWTGVRNYQARNFMRDTMRVGDGVLFYHSSCPEPGIAGLAEVASTPYPDPTQFD ADSPYYDPKSKQDAPRWVLVDVRFVKKTALVPLAALREHDALAEMRVLAKGNRLSITPVTRAEWRFITERLMK >Mature_153_residues MQFWLMKSEPDEASIDDLAAAPQRTLPWTGVRNYQARNFMRDTMRVGDGVLFYHSSCPEPGIAGLAEVASTPYPDPTQFD ADSPYYDPKSKQDAPRWVLVDVRFVKKTALVPLAALREHDALAEMRVLAKGNRLSITPVTRAEWRFITERLMK
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=162, Percent_Identity=48.1481481481481, Blast_Score=150, Evalue=4e-37, Organism=Homo sapiens, GI40806221, Length=162, Percent_Identity=48.1481481481481, Blast_Score=150, Evalue=4e-37, Organism=Homo sapiens, GI7661804, Length=162, Percent_Identity=48.1481481481481, Blast_Score=150, Evalue=4e-37, Organism=Homo sapiens, GI83267859, Length=105, Percent_Identity=52.3809523809524, Blast_Score=124, Evalue=2e-29, Organism=Homo sapiens, GI40806219, Length=105, Percent_Identity=52.3809523809524, Blast_Score=124, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17385; Mature: 17385
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFWLMKSEPDEASIDDLAAAPQRTLPWTGVRNYQARNFMRDTMRVGDGVLFYHSSCPEP CEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GIAGLAEVASTPYPDPTQFDADSPYYDPKSKQDAPRWVLVDVRFVKKTALVPLAALREHD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH ALAEMRVLAKGNRLSITPVTRAEWRFITERLMK HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure MQFWLMKSEPDEASIDDLAAAPQRTLPWTGVRNYQARNFMRDTMRVGDGVLFYHSSCPEP CEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC GIAGLAEVASTPYPDPTQFDADSPYYDPKSKQDAPRWVLVDVRFVKKTALVPLAALREHD CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH ALAEMRVLAKGNRLSITPVTRAEWRFITERLMK HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA