Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is cobP [H]
Identifier: 238028352
GI number: 238028352
Start: 3192994
End: 3193578
Strand: Direct
Name: cobP [H]
Synonym: bglu_1g28130
Alternate gene names: 238028352
Gene position: 3192994-3193578 (Clockwise)
Preceding gene: 238028348
Following gene: 238028353
Centisome position: 81.74
GC content: 76.24
Gene sequence:
>585_bases ATGACTTCGCACGACCTCACCTTCGTCCTCGGCGGCGCGCGCTCGGGCAAGAGCGCGTTCGCCGAACGGCTCGCGGCCGA CAGCGGCCGCGCCGTCACCTATGTCGCGACCGCCGCGGTGGTCGGCGACGCCGAATTCGACGCGCGCATCGCCCACCATC GCGCGCGCCGGCCCGCGTCGTGGGCGCTCGTCGAGGCGCCCGAGGCGCTCGCCGAGGCGCTCGCCGCACTCGACGACCCG CATGGCTGCGTGCTGGTCGACTGCCTGACGCTGTGGCTCGCGAACCTGCTGTGCCCACCCGACGGCGCGAGCGTCTCCGA CGCGGTGCTCGAAGCGCGCGTCGGCGCGCTGGAAGCCGCGCTCGCCGCCTCGCGCGCGCGCGTGATCGTGGTCGGCAACG AGATCGGGCTCGGCGTGGTGCCGCTCGGCGCCGAAACGCGCCGCTACGTCGACGAACTCGGCCGGCTCAACCAGCGCATC GCCGCGCTGGCCACGCGCGTGACCCTGGTCGTGGCCGGCCTGCCGCTCGCCCTCAAGGGCGCGCCGGCGGCCGCCGCTGC CGCGCAGGCGGCCCCGCGATGCTGA
Upstream 100 bases:
>100_bases GGGCAGCGGCCCGGCGGGCAGGCGATCGAAAGCGGTCATCGGAGCGAAAACTGGCGGGAGGCGAAGGCCGCATTATCTCC CGCCCCGTTACAATCACGCG
Downstream 100 bases:
>100_bases TGCTGTCGCTGCCCGCCGTCGCGATCCTCGCGGTCGCCGCGTTCCTCGTTGACTGGCGGTTCGGCGAGCCGCGCCGCGCC CATCCGCTGGTCGGCTTCGG
Product: adenosylcobinamide kinase
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTSHDLTFVLGGARSGKSAFAERLAADSGRAVTYVATAAVVGDAEFDARIAHHRARRPASWALVEAPEALAEALAALDDP HGCVLVDCLTLWLANLLCPPDGASVSDAVLEARVGALEAALAASRARVIVVGNEIGLGVVPLGAETRRYVDELGRLNQRI AALATRVTLVVAGLPLALKGAPAAAAAAQAAPRC
Sequences:
>Translated_194_residues MTSHDLTFVLGGARSGKSAFAERLAADSGRAVTYVATAAVVGDAEFDARIAHHRARRPASWALVEAPEALAEALAALDDP HGCVLVDCLTLWLANLLCPPDGASVSDAVLEARVGALEAALAASRARVIVVGNEIGLGVVPLGAETRRYVDELGRLNQRI AALATRVTLVVAGLPLALKGAPAAAAAAQAAPRC >Mature_193_residues TSHDLTFVLGGARSGKSAFAERLAADSGRAVTYVATAAVVGDAEFDARIAHHRARRPASWALVEAPEALAEALAALDDPH GCVLVDCLTLWLANLLCPPDGASVSDAVLEARVGALEAALAASRARVIVVGNEIGLGVVPLGAETRRYVDELGRLNQRIA ALATRVTLVVAGLPLALKGAPAAAAAAQAAPRC
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=182, Percent_Identity=39.5604395604396, Blast_Score=115, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 19816; Mature: 19685
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHDLTFVLGGARSGKSAFAERLAADSGRAVTYVATAAVVGDAEFDARIAHHRARRPAS CCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHCCCCC WALVEAPEALAEALAALDDPHGCVLVDCLTLWLANLLCPPDGASVSDAVLEARVGALEAA CHHEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LAASRARVIVVGNEIGLGVVPLGAETRRYVDELGRLNQRIAALATRVTLVVAGLPLALKG HHHCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC APAAAAAAQAAPRC CCHHHHHHHCCCCC >Mature Secondary Structure TSHDLTFVLGGARSGKSAFAERLAADSGRAVTYVATAAVVGDAEFDARIAHHRARRPAS CCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHCCCCC WALVEAPEALAEALAALDDPHGCVLVDCLTLWLANLLCPPDGASVSDAVLEARVGALEAA CHHEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LAASRARVIVVGNEIGLGVVPLGAETRRYVDELGRLNQRIAALATRVTLVVAGLPLALKG HHHCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC APAAAAAAQAAPRC CCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]