Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028312
Identifier: 238028312
GI number: 238028312
Start: 3142915
End: 3143181
Strand: Direct
Name: 238028312
Synonym: bglu_1g27730
Alternate gene names: NA
Gene position: 3142915-3143181 (Clockwise)
Preceding gene: 238028309
Following gene: 238028315
Centisome position: 80.45
GC content: 59.18
Gene sequence:
>267_bases ATGGCAGGAAATCTGGTTATCGTGTGCCGGGATCAGGACGCGGACGCGTTCTACACGCTGATGCAGGAGTACGGTGCGTT CCAGGCGCGGCTGTCGTCTACCGCGTGGTATCTGAACATGAACATCGTGCCGGAATCGCTGCAGGACGAAATCCTCGAGC GGCTCGGCAAGTACACGACTTTGTATATCTTCGAGGCGACGAGCGTCACCTACAACACCATCGACAGCCACGCGGCGGAA ACGCTCGGGTCGCTGTTCGGCGAGTAG
Upstream 100 bases:
>100_bases CGCCGCGCGGGTCCGGCCAAACGTGGGCAAAGAGCCGCAGCGAAGCAGGTATGATCGAGTCTGCTTGGCAAGAACGAACG TCTACATGCAGGAGGGCTGA
Downstream 100 bases:
>100_bases CCCGACACGCCGGCGCGGCGCCCGCCGCGCCGGCCCTCTCCGCTTGCTTTCGAGTCCCGGCGGCTCACGCCCCCGCGGGG TCGCGTTCGGGTTTGGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MAGNLVIVCRDQDADAFYTLMQEYGAFQARLSSTAWYLNMNIVPESLQDEILERLGKYTTLYIFEATSVTYNTIDSHAAE TLGSLFGE
Sequences:
>Translated_88_residues MAGNLVIVCRDQDADAFYTLMQEYGAFQARLSSTAWYLNMNIVPESLQDEILERLGKYTTLYIFEATSVTYNTIDSHAAE TLGSLFGE >Mature_87_residues AGNLVIVCRDQDADAFYTLMQEYGAFQARLSSTAWYLNMNIVPESLQDEILERLGKYTTLYIFEATSVTYNTIDSHAAET LGSLFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9898; Mature: 9767
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNLVIVCRDQDADAFYTLMQEYGAFQARLSSTAWYLNMNIVPESLQDEILERLGKYTT CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCEE LYIFEATSVTYNTIDSHAAETLGSLFGE EEEEEECCEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure AGNLVIVCRDQDADAFYTLMQEYGAFQARLSSTAWYLNMNIVPESLQDEILERLGKYTT CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHCCCEE LYIFEATSVTYNTIDSHAAETLGSLFGE EEEEEECCEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA