Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028309
Identifier: 238028309
GI number: 238028309
Start: 3138751
End: 3139248
Strand: Direct
Name: 238028309
Synonym: bglu_1g27700
Alternate gene names: NA
Gene position: 3138751-3139248 (Clockwise)
Preceding gene: 238028308
Following gene: 238028312
Centisome position: 80.35
GC content: 74.5
Gene sequence:
>498_bases ATGAGCGCGTGGCGCGGCGCGGCGGCCGTCTGCGCGCTCGCGGCGGCGGTGTCCACGCTGCCCGGCTGCGGCTCGGTGGG CGCGGCGAGCGGTGCGCTGGCCGGCGCGGCCACCGGGCTCGTCACGGCCAATCCGGCCGTCGGCATCGGCGTGGGCATCG CCGTGCAGGCCGCCACCGACGAGGCCGTCAACCGCACCATGAAGGGTTTCCACGCGCATCAGCAGGACGTGATCGCGGCC ACGGCGGGCGCGCTCGCGGTGGGCGAGACGGCGCCGTGGAAGGTGAAGAACCGGGTGCCGATCGAGAATGGCGAAGGCGA GGTGCGGGTGACGCGGGCGTTCTCGACGCCGCTGGCGCTCTGCAAGGAGTTCGCGTTCTCGGTGAAGGACGGCCAGACGG CCGACTGGTTCATCGCCAGCGCCTGTCAGGCGCCGCAGGGCCGCTGGAGTTGGGCCTCGGCGGAGCCGGCCGTGGCGCGC TGGGGCAGCCTGCAATAG
Upstream 100 bases:
>100_bases AATTGGGCTCGTCGTTCTACGTCGCGACTATCTGCCGCGACGGGCCGAAATGGAAATGGGCCTCGGCCGAACCGGCCACG GCGCGCTGGGGAGCACTGCA
Downstream 100 bases:
>100_bases CCGCGGCCGGCCGCGGGGGCGCCATGAGGCGAAGCGGCGGGCGCCCGCCGCCGCCCGCCGCCGATCAGGACTCCACGTCC TCGAGACTGAAAATCTCGGT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSAWRGAAAVCALAAAVSTLPGCGSVGAASGALAGAATGLVTANPAVGIGVGIAVQAATDEAVNRTMKGFHAHQQDVIAA TAGALAVGETAPWKVKNRVPIENGEGEVRVTRAFSTPLALCKEFAFSVKDGQTADWFIASACQAPQGRWSWASAEPAVAR WGSLQ
Sequences:
>Translated_165_residues MSAWRGAAAVCALAAAVSTLPGCGSVGAASGALAGAATGLVTANPAVGIGVGIAVQAATDEAVNRTMKGFHAHQQDVIAA TAGALAVGETAPWKVKNRVPIENGEGEVRVTRAFSTPLALCKEFAFSVKDGQTADWFIASACQAPQGRWSWASAEPAVAR WGSLQ >Mature_164_residues SAWRGAAAVCALAAAVSTLPGCGSVGAASGALAGAATGLVTANPAVGIGVGIAVQAATDEAVNRTMKGFHAHQQDVIAAT AGALAVGETAPWKVKNRVPIENGEGEVRVTRAFSTPLALCKEFAFSVKDGQTADWFIASACQAPQGRWSWASAEPAVARW GSLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16619; Mature: 16488
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAWRGAAAVCALAAAVSTLPGCGSVGAASGALAGAATGLVTANPAVGIGVGIAVQAATD CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEECCCCCEECCEEEEEECCH EAVNRTMKGFHAHQQDVIAATAGALAVGETAPWKVKNRVPIENGEGEVRVTRAFSTPLAL HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCEEEEEECCCHHHH CKEFAFSVKDGQTADWFIASACQAPQGRWSWASAEPAVARWGSLQ HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure SAWRGAAAVCALAAAVSTLPGCGSVGAASGALAGAATGLVTANPAVGIGVGIAVQAATD CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCEEECCCCCEECCEEEEEECCH EAVNRTMKGFHAHQQDVIAATAGALAVGETAPWKVKNRVPIENGEGEVRVTRAFSTPLAL HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCCCCCCCCCCCEEEEEECCCHHHH CKEFAFSVKDGQTADWFIASACQAPQGRWSWASAEPAVARWGSLQ HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA