| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is proW [C]
Identifier: 238028311
GI number: 238028311
Start: 3140661
End: 3142415
Strand: Reverse
Name: proW [C]
Synonym: bglu_1g27720
Alternate gene names: 238028311
Gene position: 3142415-3140661 (Counterclockwise)
Preceding gene: 238028313
Following gene: 238028310
Centisome position: 80.44
GC content: 66.67
Gene sequence:
>1755_bases ATGGACTTTGGCTTCAATCCGAACCGCATCGCGAACGCCTCGGCGTGGCGCGTGCTCCCGAACCGTTGGGACTTCATCGC CTTTCCGTTGATCCTGTGCGTGATCGCGATGGCGGCGGTCGGCTTCCACGAGACGATGGCGCCGATCGCCACGCTCTCCA CCCAGAAGATTTCGCTCGATCCGGCGAACCTGCCGGAGTACGCGCTGCGCACCACGCTGCGCATGCTGGCCGCGATGATC GCCTCGCTCGTCTTCACGCTGGTCTACGGCACGCTGGCGGCCAAGAGCCGCCGCGCGGGGATGGTGCTGGTGCCGATCCT CGACATCCTGCAGTCGGTGCCGGTGCTCGGCTACATCTCGTTTACCGTTACGTTCTTCCTCGCGCTGATCCCGAGCCGCG TGGCGGGCGCCGAACTGGCCGCGATCTTCGCGATCTTCACCAGCCAGGCCTGGAACATGACGTTCAGCTTTTACCAGTCG CTGCGCACCGTGCCGCGCGACCTCGACGAGGTCTCGCGCGGCTTCCACCTGACGTCCTGGCAGCGCTTCTGGAAGCTCGA GGTGCCGTTCTCGATGCCGGGTCTGGTCTGGAACATGATGATGTCGATGTCGGGCGGCTGGTTCTTCGTGGTGGCCTCGG AGGCGATCACGGTGGGCAACCACACCATCACGCTCCCCGGCATCGGCGCCTACCTGGCGCAGGCCATCACCGAGCAGAAC CTGCACGCGGTGGGCTGGGTGATCCTGACCATGACGGTGGTGATCCTTGCCTACGACCAGCTGCTGTTCCGCCCGCTGGT GGCCTGGGCCGACAAGTTCCGCATGGAGAACACCAGTTCGGGCAACGCGCCCGAATCCTGGCTGCTCGATCTGGTGCGCC GCACGCGCCTGATCCACCAGCTGCTGGTGCCGGCCGGCTGGCTGTTCGCGAAAATGGCACGGCTGCCGTTCCGGCTGCCG AGCTTCGACGCCGCGCGCTTCGCGCTGCCGCGCGTCGAGAAGCAGGCGTCGCGCGTGGCCGACATCGGCTGGGCGATCCT CGTGCTGCTCGGCACCGCCTACGTGGTCTGGCGCGTGGTGGCGTTCGTCAGCACCGGCGTGACGCTCGCCGAGGTCGGCC ACGTGTTCCTGCTCGGGCTCGCCACGCTGCTGCGCGTGGTGGTGCTGATCGTGATCGCCTCGGTGATCTGGGTGCCGATC GGCGTCTGGATCGGCCTGCGCCCGGCGCTCGCCGAGAAGGCCCAGCCGGTCGCGCAGTTCCTCGCGGCGTTCCCGGCCAA CCTGCTGTTCCCGGTGTTCGTGATCGTGATCGCGCGCTACAAGCTGAACCCGGACATCTGGCTGTCGCCGCTGATCGTGC TCGGCACGCAGTGGTACATCCTGTTCAACGTGATCGCGGGCGCGACGTCCTACCCGAACGACTATCGCGAGGCCGCCACC AATTTCCGCATCCGCGGCTGGCAATGGTGGCGCCAGGCGATCCTGCCCGGCATCATGCCGTACTACATCACGGGCGCGAT CACCGCCTCGGGCGGGGCCTGGAACGCGAGCATCGTCTCGGAGTTCGTCCAGTGGGGCGACACCAAGTTCGAGGCGCACG GGCTCGGCGCCTATATCGCGCAGATGACGGCGGCCGGAGACTACCCGAAGATCATCATGGGCATCACCGTGATGTCGCTG TTCGTGACGCTGTTCAACCGCCTGTTGTGGCGCCCGCTGTACGCCTATGCCGAAGCCAAGCTGCGGCTCGACTAA
Upstream 100 bases:
>100_bases CAGTCGTAACGAAACACCGCGCTTCGCGCCTTACCATGAGTCGTGTGTACATGATGGCCTTAATCTTTGACTCGATCGGC CGTACCGGGGAGGGCGCCTG
Downstream 100 bases:
>100_bases GACTCATTGAGAGCGAAACGCGATGCAAAACCAGAATGCTGCCCCGACGCCGGCGCCGCTGCGCCTGGGCGACGAGATCC TGAACGTCAAGGATGTCAGC
Product: ABC transporter permease
Products: ADP; phosphate; L-proline [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease; ABC Transporter Membrane Protein; ABC Transporter Nitrate Permease; ABC Transporter; ABC Anion Transporter; ABC-Type Anion Transport System Permease Component; Anion Transporter Permease Protein; Nitrate ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Transmembrane Permease Protein; ABC-Type Anion Transport System; ABC-Type Nitrate Transport Permease; ABC Transport System Permease Protein; Transmembrane ABC Transporter Protein; Nitrate Transport System Permease Protein; Nitrate ABC Transporter Permease Protein; Anion ABC Transporter Permease; Taurine ABC Transporter Permease Protein; Sugar ABC Transporter; Sugar ABC Transporter 1 Permease Protein; Sulfonate Transport Permease Protein; Nitrate Transport System Permease
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MDFGFNPNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEYALRTTLRMLAAMI ASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQS LRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQN LHAVGWVILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKMARLPFRLP SFDAARFALPRVEKQASRVADIGWAILVLLGTAYVVWRVVAFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPI GVWIGLRPALAEKAQPVAQFLAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIAQMTAAGDYPKIIMGITVMSL FVTLFNRLLWRPLYAYAEAKLRLD
Sequences:
>Translated_584_residues MDFGFNPNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEYALRTTLRMLAAMI ASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQS LRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQN LHAVGWVILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKMARLPFRLP SFDAARFALPRVEKQASRVADIGWAILVLLGTAYVVWRVVAFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPI GVWIGLRPALAEKAQPVAQFLAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIAQMTAAGDYPKIIMGITVMSL FVTLFNRLLWRPLYAYAEAKLRLD >Mature_584_residues MDFGFNPNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLDPANLPEYALRTTLRMLAAMI ASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYISFTVTFFLALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQS LRTVPRDLDEVSRGFHLTSWQRFWKLEVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQN LHAVGWVILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQLLVPAGWLFAKMARLPFRLP SFDAARFALPRVEKQASRVADIGWAILVLLGTAYVVWRVVAFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPI GVWIGLRPALAEKAQPVAQFLAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIAQMTAAGDYPKIIMGITVMSL FVTLFNRLLWRPLYAYAEAKLRLD
Specific function: Involved In A Multicomponent Binding-Protein-Dependent Transport System For Glycine Betaine/L-Proline. [C]
COG id: COG4986
COG function: function code P; ABC-type anion transport system, duplicated permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65034; Mature: 65034
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFGFNPNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLD CCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC PANLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYIS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHH FTVTFFLALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCH QRFWKLEVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQN HHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCHHHHHHHHHHHCC LHAVGWVILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LLVPAGWLFAKMARLPFRLPSFDAARFALPRVEKQASRVADIGWAILVLLGTAYVVWRVV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPIGVWIGLRPALAEKAQPVAQF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT HHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIA CCCCCHHHHHHHHHHHCHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCEECCCHHHHHH QMTAAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRLD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDFGFNPNRIANASAWRVLPNRWDFIAFPLILCVIAMAAVGFHETMAPIATLSTQKISLD CCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC PANLPEYALRTTLRMLAAMIASLVFTLVYGTLAAKSRRAGMVLVPILDILQSVPVLGYIS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCHHHHHH FTVTFFLALIPSRVAGAELAAIFAIFTSQAWNMTFSFYQSLRTVPRDLDEVSRGFHLTSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCH QRFWKLEVPFSMPGLVWNMMMSMSGGWFFVVASEAITVGNHTITLPGIGAYLAQAITEQN HHHEEEECCCCCHHHHHHHHHHCCCCEEEEEECCEEEECCCEEECCCHHHHHHHHHHHCC LHAVGWVILTMTVVILAYDQLLFRPLVAWADKFRMENTSSGNAPESWLLDLVRRTRLIHQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH LLVPAGWLFAKMARLPFRLPSFDAARFALPRVEKQASRVADIGWAILVLLGTAYVVWRVV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFVSTGVTLAEVGHVFLLGLATLLRVVVLIVIASVIWVPIGVWIGLRPALAEKAQPVAQF HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LAAFPANLLFPVFVIVIARYKLNPDIWLSPLIVLGTQWYILFNVIAGATSYPNDYREAAT HHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NFRIRGWQWWRQAILPGIMPYYITGAITASGGAWNASIVSEFVQWGDTKFEAHGLGAYIA CCCCCHHHHHHHHHHHCHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCEECCCHHHHHH QMTAAGDYPKIIMGITVMSLFVTLFNRLLWRPLYAYAEAKLRLD HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-proline [Periplasm]; H2O [C]
Specific reaction: ATP + L-proline [Periplasm] + H2O = ADP + phosphate + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA