| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028305
Identifier: 238028305
GI number: 238028305
Start: 3135422
End: 3136069
Strand: Reverse
Name: 238028305
Synonym: bglu_1g27660
Alternate gene names: NA
Gene position: 3136069-3135422 (Counterclockwise)
Preceding gene: 238028306
Following gene: 238028301
Centisome position: 80.28
GC content: 73.92
Gene sequence:
>648_bases ATGCGTGACGGCCAGCAGGCTGACTGGCCCGGCCAAGCCGGGCCAGTCAGAGCAACGCAGGCAAGGGGCGGCGCCGCGGC GCCGCCTTTTTTCGTCGTCACAGGCGGGCCGGGCGCGGGCAAGAGCACCCTCGTCGACGCGCTGGCCGCGCGCGGGCTGG CCCGCACCGACGAGGCGGGGCGCGGCGTGATCGTCGACCAGGTGGCGATCGACGGGCCCGCGCTGCCGTGGCGCGATCGC GCGGCGTTTGCGGAGCTGATGCTCGCCTGGGAAATGCGCTCCTACGCGATGGCGGAACGCGTGGCGGCGCGCGGTGCCGG GCCGGTGCTCTTCGATCGCGGCGTGCCGGACGTGATCGGCTATCTGCGGCTGTGCGGGCTGCCCGTGCCGCCGCACGTGC TGGCGGCGGCGCGGCGATATCGCTATCGCAGCCCGGTGTTCCTCGCCCCGCCGTGGCCCGAGATCTACGTGCGCGACGCC GAGCGCAAGCAGGATTACGCCGAAGCGGTGCGTACCGCGGAGGTGATGAGTCGGGTCTATCGCGCGCTCGGCTACCGGCT CGTCGAACTGCCTTGCGTGGCGGTCGAGGCGCGCTGCCGGTTCGTGCTCGACACGCTCGCCGCCGACGGCTCGGCGCACG CGCGCTGA
Upstream 100 bases:
>100_bases CGCAACGATCTCTCGGTGTGGCGCGATTCGTTCGTCTCGGACCTGCGCAGCGTGGCCACGGCCGTGTCGGTCACGCAGCG CGCGGGACGGCGCACCGCGG
Downstream 100 bases:
>100_bases GCCGTCGGCCCGGAAGGCTCAGGATCCGGCGTCCGCGGCGCCTGCACCGATTCGCAGCAGGCTCACGCAGGCGGCGAGCG CCGCGAACGCGGTGGCGACG
Product: ATPase-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRDGQQADWPGQAGPVRATQARGGAAAPPFFVVTGGPGAGKSTLVDALAARGLARTDEAGRGVIVDQVAIDGPALPWRDR AAFAELMLAWEMRSYAMAERVAARGAGPVLFDRGVPDVIGYLRLCGLPVPPHVLAAARRYRYRSPVFLAPPWPEIYVRDA ERKQDYAEAVRTAEVMSRVYRALGYRLVELPCVAVEARCRFVLDTLAADGSAHAR
Sequences:
>Translated_215_residues MRDGQQADWPGQAGPVRATQARGGAAAPPFFVVTGGPGAGKSTLVDALAARGLARTDEAGRGVIVDQVAIDGPALPWRDR AAFAELMLAWEMRSYAMAERVAARGAGPVLFDRGVPDVIGYLRLCGLPVPPHVLAAARRYRYRSPVFLAPPWPEIYVRDA ERKQDYAEAVRTAEVMSRVYRALGYRLVELPCVAVEARCRFVLDTLAADGSAHAR >Mature_215_residues MRDGQQADWPGQAGPVRATQARGGAAAPPFFVVTGGPGAGKSTLVDALAARGLARTDEAGRGVIVDQVAIDGPALPWRDR AAFAELMLAWEMRSYAMAERVAARGAGPVLFDRGVPDVIGYLRLCGLPVPPHVLAAARRYRYRSPVFLAPPWPEIYVRDA ERKQDYAEAVRTAEVMSRVYRALGYRLVELPCVAVEARCRFVLDTLAADGSAHAR
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23228; Mature: 23228
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDGQQADWPGQAGPVRATQARGGAAAPPFFVVTGGPGAGKSTLVDALAARGLARTDEAG CCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC RGVIVDQVAIDGPALPWRDRAAFAELMLAWEMRSYAMAERVAARGAGPVLFDRGVPDVIG CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH YLRLCGLPVPPHVLAAARRYRYRSPVFLAPPWPEIYVRDAERKQDYAEAVRTAEVMSRVY HHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH RALGYRLVELPCVAVEARCRFVLDTLAADGSAHAR HHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRDGQQADWPGQAGPVRATQARGGAAAPPFFVVTGGPGAGKSTLVDALAARGLARTDEAG CCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC RGVIVDQVAIDGPALPWRDRAAFAELMLAWEMRSYAMAERVAARGAGPVLFDRGVPDVIG CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHH YLRLCGLPVPPHVLAAARRYRYRSPVFLAPPWPEIYVRDAERKQDYAEAVRTAEVMSRVY HHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH RALGYRLVELPCVAVEARCRFVLDTLAADGSAHAR HHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA