| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is otsA [H]
Identifier: 238028306
GI number: 238028306
Start: 3136062
End: 3137480
Strand: Reverse
Name: otsA [H]
Synonym: bglu_1g27670
Alternate gene names: 238028306
Gene position: 3137480-3136062 (Counterclockwise)
Preceding gene: 238028307
Following gene: 238028305
Centisome position: 80.31
GC content: 68.5
Gene sequence:
>1419_bases ATGAGCAGATTGATCGTGGTTTCGAATCGTGTGGCAGCCGGGCAGGACACGCGTCCGTCGGCGGGCGGGCTCGCGGTGGG CGTGCTCGATGCGCTGCAGCAGTCGGGCGGGATCTGGTTCGGGTGGAACGGCGAGATCGTCGGCGAGCCGGGCGAGCCGG TGATCGAGCGCGAAGGCAACCTCACCTACGCGACGGTGGGGCTCACGCGGCGCGATTACGACCAGTATTACCGCGGCTTC TCGAACGCCACGCTGTGGCCGGTATTCCACTACCGCATGGATCTCGCGCGCTTCGACCGGCAGGAGTACGAAGGCTATCA GCGCGTGAACGCGACGCTCGCCGCGCAACTGCGTGCGCTGATCCGGCCCGACGACATCATCTGGGTTCACGATTACCACC TGCTGCCGTTCGCGCACGCGCTGCGCGCGCTCGGCGTGCAGAACCCGATCGGCTTCTTCCTGCACATCCCGTTCCCCTCG CCGGAGGTGCTGCGCACCGTGCCGCCGCACGAGGAGCTGGTCCGCTGCCTGTGCGCCTACGACGTGGTGGGTTTCCAGAC CGAATCGGACCAGCAGGCGTTCGTCGACTACATCGAACGGCGCGGCATCGGCACCGCCAGCGAGGACGGCATGCTCCACG TCCACGGCCGCGTCGTGAAGGTCGGCGCCTATCCGATCGGGGTCTATCCGGAGGCGATTGCGGAAGCCGCGCGCCAGCAT GCGCAACGCAAGCCGGTGGCCGCGCTGCGCAACGCGGTCCGCGATCGCAAGCTGGTGATGAGCGTGGACCGGCTCGATTA TTCGAAGGGGCTCGTCGAGCGCTTCCAGGCGTTCGAGCGGATGCTGGCCAGTGCGCCCGGCTGGCAGGGGCGCGTCTCGT TCGTGCAGGTCGCGCCGCCGACGCGCTCCGACGTGCAGACCTACCAGCGGATTCGCCAGACGCTGGAGCAGGAGGCGGGC CGTATCAACGGCCGCTTCGCGCAGCTCGACTGGACCCCGATCCAGTATCTGAACCGCAAGTACGAGCGCAACCTGCTGAT GGCGCTGTTGCGGCATGCGCACGTCGGCTACGTGACGCCGCTGCGCGACGGCATGAATCTGGTTGCGAAGGAATACGTCG CCTCGCAGAATCCCGAGGATCCCGGCGTGCTGGTGCTGTCCGAGTTCGCCGGTGCCGCGGCCGAGCTGCCGGGCGCGCTG ATCGTCAATCCCGCCGACCTTTCGCAGATGGCCGAGGCGCTCGAGCGTGCGCTGTCGATGCCGCTCGGCGAGCGGCGCGA GCGGCACGCCAGCAACTTCGCCGCGCTCAAGCGCAACGATCTCTCGGTGTGGCGCGATTCGTTCGTCTCGGACCTGCGCA GCGTGGCCACGGCCGTGTCGGTCACGCAGCGCGCGGGACGGCGCACCGCGGATGCGTGA
Upstream 100 bases:
>100_bases GCGTGACATCCGCGCCGTCGCGCCGGGCACCTCGCGTGCTTGCGACGGGGGACCGGGCGTGGTCACGCACCGTGGTATCC AGCACAGGAGGTCAGGCCGT
Downstream 100 bases:
>100_bases CGGCCAGCAGGCTGACTGGCCCGGCCAAGCCGGGCCAGTCAGAGCAACGCAGGCAAGGGGCGGCGCCGCGGCGCCGCCTT TTTTCGTCGTCACAGGCGGG
Product: alpha,alpha-trehalose-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSRLIVVSNRVAAGQDTRPSAGGLAVGVLDALQQSGGIWFGWNGEIVGEPGEPVIEREGNLTYATVGLTRRDYDQYYRGF SNATLWPVFHYRMDLARFDRQEYEGYQRVNATLAAQLRALIRPDDIIWVHDYHLLPFAHALRALGVQNPIGFFLHIPFPS PEVLRTVPPHEELVRCLCAYDVVGFQTESDQQAFVDYIERRGIGTASEDGMLHVHGRVVKVGAYPIGVYPEAIAEAARQH AQRKPVAALRNAVRDRKLVMSVDRLDYSKGLVERFQAFERMLASAPGWQGRVSFVQVAPPTRSDVQTYQRIRQTLEQEAG RINGRFAQLDWTPIQYLNRKYERNLLMALLRHAHVGYVTPLRDGMNLVAKEYVASQNPEDPGVLVLSEFAGAAAELPGAL IVNPADLSQMAEALERALSMPLGERRERHASNFAALKRNDLSVWRDSFVSDLRSVATAVSVTQRAGRRTADA
Sequences:
>Translated_472_residues MSRLIVVSNRVAAGQDTRPSAGGLAVGVLDALQQSGGIWFGWNGEIVGEPGEPVIEREGNLTYATVGLTRRDYDQYYRGF SNATLWPVFHYRMDLARFDRQEYEGYQRVNATLAAQLRALIRPDDIIWVHDYHLLPFAHALRALGVQNPIGFFLHIPFPS PEVLRTVPPHEELVRCLCAYDVVGFQTESDQQAFVDYIERRGIGTASEDGMLHVHGRVVKVGAYPIGVYPEAIAEAARQH AQRKPVAALRNAVRDRKLVMSVDRLDYSKGLVERFQAFERMLASAPGWQGRVSFVQVAPPTRSDVQTYQRIRQTLEQEAG RINGRFAQLDWTPIQYLNRKYERNLLMALLRHAHVGYVTPLRDGMNLVAKEYVASQNPEDPGVLVLSEFAGAAAELPGAL IVNPADLSQMAEALERALSMPLGERRERHASNFAALKRNDLSVWRDSFVSDLRSVATAVSVTQRAGRRTADA >Mature_471_residues SRLIVVSNRVAAGQDTRPSAGGLAVGVLDALQQSGGIWFGWNGEIVGEPGEPVIEREGNLTYATVGLTRRDYDQYYRGFS NATLWPVFHYRMDLARFDRQEYEGYQRVNATLAAQLRALIRPDDIIWVHDYHLLPFAHALRALGVQNPIGFFLHIPFPSP EVLRTVPPHEELVRCLCAYDVVGFQTESDQQAFVDYIERRGIGTASEDGMLHVHGRVVKVGAYPIGVYPEAIAEAARQHA QRKPVAALRNAVRDRKLVMSVDRLDYSKGLVERFQAFERMLASAPGWQGRVSFVQVAPPTRSDVQTYQRIRQTLEQEAGR INGRFAQLDWTPIQYLNRKYERNLLMALLRHAHVGYVTPLRDGMNLVAKEYVASQNPEDPGVLVLSEFAGAAAELPGALI VNPADLSQMAEALERALSMPLGERRERHASNFAALKRNDLSVWRDSFVSDLRSVATAVSVTQRAGRRTADA
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=465, Percent_Identity=51.3978494623656, Blast_Score=486, Evalue=1e-138, Organism=Caenorhabditis elegans, GI115533558, Length=357, Percent_Identity=31.0924369747899, Blast_Score=158, Evalue=7e-39, Organism=Caenorhabditis elegans, GI115533560, Length=357, Percent_Identity=31.0924369747899, Blast_Score=157, Evalue=8e-39, Organism=Caenorhabditis elegans, GI71987012, Length=426, Percent_Identity=28.4037558685446, Blast_Score=156, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319602, Length=466, Percent_Identity=33.2618025751073, Blast_Score=284, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6320279, Length=424, Percent_Identity=29.7169811320755, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6323917, Length=373, Percent_Identity=28.1501340482574, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6323537, Length=431, Percent_Identity=28.0742459396752, Blast_Score=178, Evalue=2e-45, Organism=Drosophila melanogaster, GI19920676, Length=484, Percent_Identity=35.3305785123967, Blast_Score=282, Evalue=4e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 52802; Mature: 52670
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIVVSNRVAAGQDTRPSAGGLAVGVLDALQQSGGIWFGWNGEIVGEPGEPVIEREGN CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEECCCCCCCCEECCCC LTYATVGLTRRDYDQYYRGFSNATLWPVFHYRMDLARFDRQEYEGYQRVNATLAAQLRAL EEEEEECCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRPDDIIWVHDYHLLPFAHALRALGVQNPIGFFLHIPFPSPEVLRTVPPHEELVRCLCAY CCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHHH DVVGFQTESDQQAFVDYIERRGIGTASEDGMLHVHGRVVKVGAYPIGVYPEAIAEAARQH HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECEECCCCHHHHHHHHHHH AQRKPVAALRNAVRDRKLVMSVDRLDYSKGLVERFQAFERMLASAPGWQGRVSFVQVAPP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC TRSDVQTYQRIRQTLEQEAGRINGRFAQLDWTPIQYLNRKYERNLLMALLRHAHVGYVTP CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEECC LRDGMNLVAKEYVASQNPEDPGVLVLSEFAGAAAELPGALIVNPADLSQMAEALERALSM HHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCHHHHCCCEEEECHHHHHHHHHHHHHHHCC PLGERRERHASNFAALKRNDLSVWRDSFVSDLRSVATAVSVTQRAGRRTADA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRLIVVSNRVAAGQDTRPSAGGLAVGVLDALQQSGGIWFGWNGEIVGEPGEPVIEREGN CCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEECCCCCCCCEECCCC LTYATVGLTRRDYDQYYRGFSNATLWPVFHYRMDLARFDRQEYEGYQRVNATLAAQLRAL EEEEEECCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRPDDIIWVHDYHLLPFAHALRALGVQNPIGFFLHIPFPSPEVLRTVPPHEELVRCLCAY CCCCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHCCCCHHHHHHHHHHH DVVGFQTESDQQAFVDYIERRGIGTASEDGMLHVHGRVVKVGAYPIGVYPEAIAEAARQH HHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECEECCCCHHHHHHHHHHH AQRKPVAALRNAVRDRKLVMSVDRLDYSKGLVERFQAFERMLASAPGWQGRVSFVQVAPP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC TRSDVQTYQRIRQTLEQEAGRINGRFAQLDWTPIQYLNRKYERNLLMALLRHAHVGYVTP CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEECC LRDGMNLVAKEYVASQNPEDPGVLVLSEFAGAAAELPGALIVNPADLSQMAEALERALSM HHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCHHHHCCCEEEECHHHHHHHHHHHHHHHCC PLGERRERHASNFAALKRNDLSVWRDSFVSDLRSVATAVSVTQRAGRRTADA CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA