Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028299
Identifier: 238028299
GI number: 238028299
Start: 3130971
End: 3131330
Strand: Reverse
Name: 238028299
Synonym: bglu_1g27600
Alternate gene names: NA
Gene position: 3131330-3130971 (Counterclockwise)
Preceding gene: 238028300
Following gene: 238028297
Centisome position: 80.16
GC content: 69.44
Gene sequence:
>360_bases GTGGAGAGCATCATGATCAACAAGAAAATCGTCGCAGTGCTGGTGGCCGCCGGGACGCTCGTCGCCGCCGGCCCGGCTTC CGCTCATGGGCGCTGGCACGATCACGGCGGGGGCGGCGCGGTGGTCGGTGCGCTGATCGGGGGCGCCGTGCTCGGCGCGA TCGTCTCGTCGGCCTTGACGCCCGAGCCGGCCTACGCGGCGCCGGCCTATCAGCCCGTGTATCAGCAGCCCGCGCAGTAT CAGTACCAGCAGACTTATGCCGGCCCGCCGCCAGGCACCTGCTATGACGGCTACCGCAATGCCTACGTGGCCTGTGGCCC GCAGCCGGCCCCCGACTACTATCCGCAACAGGGATGGTGA
Upstream 100 bases:
>100_bases TTTCGACGTTCGACGGATTCAGCAACCTAAGTGGGTGCCGTGTCCTGAGTTACGGGGGCAACTCCAATCCCACAATTCGC TCCATCACGTACCACTTCGA
Downstream 100 bases:
>100_bases GCAAGCGCCGCGCGCCGCCCTGGCGGCGGCGACGGCGGCGCGTGGTATTCAGCTAGGCAGAATATAAAAGCGCCCGCACC GGCACCGCCGGGCGGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MESIMINKKIVAVLVAAGTLVAAGPASAHGRWHDHGGGGAVVGALIGGAVLGAIVSSALTPEPAYAAPAYQPVYQQPAQY QYQQTYAGPPPGTCYDGYRNAYVACGPQPAPDYYPQQGW
Sequences:
>Translated_119_residues MESIMINKKIVAVLVAAGTLVAAGPASAHGRWHDHGGGGAVVGALIGGAVLGAIVSSALTPEPAYAAPAYQPVYQQPAQY QYQQTYAGPPPGTCYDGYRNAYVACGPQPAPDYYPQQGW >Mature_119_residues MESIMINKKIVAVLVAAGTLVAAGPASAHGRWHDHGGGGAVVGALIGGAVLGAIVSSALTPEPAYAAPAYQPVYQQPAQY QYQQTYAGPPPGTCYDGYRNAYVACGPQPAPDYYPQQGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12291; Mature: 12291
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESIMINKKIVAVLVAAGTLVAAGPASAHGRWHDHGGGGAVVGALIGGAVLGAIVSSALT CCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PEPAYAAPAYQPVYQQPAQYQYQQTYAGPPPGTCYDGYRNAYVACGPQPAPDYYPQQGW CCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MESIMINKKIVAVLVAAGTLVAAGPASAHGRWHDHGGGGAVVGALIGGAVLGAIVSSALT CCCCCCHHHHHHHHHHHCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC PEPAYAAPAYQPVYQQPAQYQYQQTYAGPPPGTCYDGYRNAYVACGPQPAPDYYPQQGW CCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA