| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028284
Identifier: 238028284
GI number: 238028284
Start: 3112644
End: 3113012
Strand: Direct
Name: 238028284
Synonym: bglu_1g27410
Alternate gene names: NA
Gene position: 3112644-3113012 (Clockwise)
Preceding gene: 238028283
Following gene: 238028285
Centisome position: 79.68
GC content: 62.6
Gene sequence:
>369_bases ATGACCATGCCGCGCATCCAGCTCAAAGCCACCGCCCCCGTCACTGCTGATCGCCGCCACACCCTCTCGCTCCGCACCGT TGTGCGCTATGACCGCAATGCCGCTCGCCCATCCACCCCGATCCTCATCGGCAAATATGTCGTCGCCCGTCGCCCCATCC CCGACAGCTTGCACACGCTGTATTTGATCCTCGACGAAGGAGACATTGCCGGCACCCAGATCTCGATCCCAAGCGAAGAC GACTGCGCGCAAGCAGTGAAGCGGCTGCGTGACAAGAAGCGAGCAGCGGCCAAGACGGCGTCGATGGCAATCCGCAAGGC GAAGAAGCGCGATAACGGTCAACGTCAGACGGCCAGGGAGACCGCGTAA
Upstream 100 bases:
>100_bases CTCGCACAAGAAGCGCCGGCCGAAGCACAGCCGGCCGCACGCCCCCTCACTGCCTAACTGCCCCGCTTATGCCGGGGTAC TCCCCGGCGCCATGGAGATC
Downstream 100 bases:
>100_bases TGGACGAACGGACGCGCCACCTCGACCTCATTGCGCCAATTCTGACTGGAACCGCGAAAGCAGCCGCAGCAGCAGCCGGC GCAACGTCCGCAGATCTCTG
Product: beta-hexosaminidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTMPRIQLKATAPVTADRRHTLSLRTVVRYDRNAARPSTPILIGKYVVARRPIPDSLHTLYLILDEGDIAGTQISIPSED DCAQAVKRLRDKKRAAAKTASMAIRKAKKRDNGQRQTARETA
Sequences:
>Translated_122_residues MTMPRIQLKATAPVTADRRHTLSLRTVVRYDRNAARPSTPILIGKYVVARRPIPDSLHTLYLILDEGDIAGTQISIPSED DCAQAVKRLRDKKRAAAKTASMAIRKAKKRDNGQRQTARETA >Mature_121_residues TMPRIQLKATAPVTADRRHTLSLRTVVRYDRNAARPSTPILIGKYVVARRPIPDSLHTLYLILDEGDIAGTQISIPSEDD CAQAVKRLRDKKRAAAKTASMAIRKAKKRDNGQRQTARETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13606; Mature: 13475
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPRIQLKATAPVTADRRHTLSLRTVVRYDRNAARPSTPILIGKYVVARRPIPDSLHTL CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCCCEEE YLILDEGDIAGTQISIPSEDDCAQAVKRLRDKKRAAAKTASMAIRKAKKRDNGQRQTARE EEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC TA CC >Mature Secondary Structure TMPRIQLKATAPVTADRRHTLSLRTVVRYDRNAARPSTPILIGKYVVARRPIPDSLHTL CCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCCCCCCEEE YLILDEGDIAGTQISIPSEDDCAQAVKRLRDKKRAAAKTASMAIRKAKKRDNGQRQTARE EEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC TA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA