| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028283
Identifier: 238028283
GI number: 238028283
Start: 3111305
End: 3111808
Strand: Direct
Name: 238028283
Synonym: bglu_1g27400
Alternate gene names: NA
Gene position: 3111305-3111808 (Clockwise)
Preceding gene: 238028249
Following gene: 238028284
Centisome position: 79.64
GC content: 57.54
Gene sequence:
>504_bases ATGAACAAGAGATCCGCACGCGAGATCCTCGCCGACAAGCTGTCAGCGTTGATGGACGCACACCCGATACTGAACACACA GGGCAAGCTCGCCGCTCGGGCTGGACTGGCACAGCGCACGGTCGGGCGCATGAAGAAGAATGAGGCTGACCCTCAGCTCG GGCACGTCGAAGCCGTCGCGACCGCACTCGGCGTGCCATTGATCGACTTGATCTCCGACGAGCAATCTCAAGGGTCGACG TTGCACTACGATATAGACGCCGTCCACCGCTTGTCGGAAGAGGACAAGAAGAAAATCGAGTCGTACATCGAGTTCGTCAT AAGTGCCAGCGGCATGGCACGTAGCCAGACCGAAGAACCACTGAATTTTTCGGAACGCATTCCTGCGACGCCCGCTCAGG CTGAGGCGGTCCGTCGGGCAGCTCAACAACCATTATCAAACAAAACGTTGAGCATTCATGAGAACCAAAGCCACGCAAAC GAGGGAAAGCGCCGGCATCGCTGA
Upstream 100 bases:
>100_bases CTATGTAAGCCCGATGTTAAGTCTTTTATGGCTATTTTTCAAGGCCAGCTCGTCGCGAGAATAGTCACTTATGACTAGCC ATATTCGGCAACATCAAACA
Downstream 100 bases:
>100_bases TTTGTCTGACTATCGAGCACGCAAGCACAAACTACCACCGACCACCTCAAAAAATTCCACCCGCGAGCGGGCAGCCTTCG CCCGGAACGCCTTATTAGGT
Product: putative repressor protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolases Of Beta-Lactamase Super
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVATALGVPLIDLISDEQSQGST LHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEPLNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHAN EGKRRHR
Sequences:
>Translated_167_residues MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVATALGVPLIDLISDEQSQGST LHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEPLNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHAN EGKRRHR >Mature_167_residues MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVATALGVPLIDLISDEQSQGST LHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEPLNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHAN EGKRRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18394; Mature: 18394
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVA CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TALGVPLIDLISDEQSQGSTLHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEP HHHCCHHHHHHCCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHCCCCCC LNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHANEGKRRHR CCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCC >Mature Secondary Structure MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVA CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TALGVPLIDLISDEQSQGSTLHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEP HHHCCHHHHHHCCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHCCCCCC LNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHANEGKRRHR CCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA