Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028283

Identifier: 238028283

GI number: 238028283

Start: 3111305

End: 3111808

Strand: Direct

Name: 238028283

Synonym: bglu_1g27400

Alternate gene names: NA

Gene position: 3111305-3111808 (Clockwise)

Preceding gene: 238028249

Following gene: 238028284

Centisome position: 79.64

GC content: 57.54

Gene sequence:

>504_bases
ATGAACAAGAGATCCGCACGCGAGATCCTCGCCGACAAGCTGTCAGCGTTGATGGACGCACACCCGATACTGAACACACA
GGGCAAGCTCGCCGCTCGGGCTGGACTGGCACAGCGCACGGTCGGGCGCATGAAGAAGAATGAGGCTGACCCTCAGCTCG
GGCACGTCGAAGCCGTCGCGACCGCACTCGGCGTGCCATTGATCGACTTGATCTCCGACGAGCAATCTCAAGGGTCGACG
TTGCACTACGATATAGACGCCGTCCACCGCTTGTCGGAAGAGGACAAGAAGAAAATCGAGTCGTACATCGAGTTCGTCAT
AAGTGCCAGCGGCATGGCACGTAGCCAGACCGAAGAACCACTGAATTTTTCGGAACGCATTCCTGCGACGCCCGCTCAGG
CTGAGGCGGTCCGTCGGGCAGCTCAACAACCATTATCAAACAAAACGTTGAGCATTCATGAGAACCAAAGCCACGCAAAC
GAGGGAAAGCGCCGGCATCGCTGA

Upstream 100 bases:

>100_bases
CTATGTAAGCCCGATGTTAAGTCTTTTATGGCTATTTTTCAAGGCCAGCTCGTCGCGAGAATAGTCACTTATGACTAGCC
ATATTCGGCAACATCAAACA

Downstream 100 bases:

>100_bases
TTTGTCTGACTATCGAGCACGCAAGCACAAACTACCACCGACCACCTCAAAAAATTCCACCCGCGAGCGGGCAGCCTTCG
CCCGGAACGCCTTATTAGGT

Product: putative repressor protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolases Of Beta-Lactamase Super

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVATALGVPLIDLISDEQSQGST
LHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEPLNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHAN
EGKRRHR

Sequences:

>Translated_167_residues
MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVATALGVPLIDLISDEQSQGST
LHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEPLNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHAN
EGKRRHR
>Mature_167_residues
MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVATALGVPLIDLISDEQSQGST
LHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEPLNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHAN
EGKRRHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18394; Mature: 18394

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TALGVPLIDLISDEQSQGSTLHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEP
HHHCCHHHHHHCCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHCCCCCC
LNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHANEGKRRHR
CCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MNKRSAREILADKLSALMDAHPILNTQGKLAARAGLAQRTVGRMKKNEADPQLGHVEAVA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TALGVPLIDLISDEQSQGSTLHYDIDAVHRLSEEDKKKIESYIEFVISASGMARSQTEEP
HHHCCHHHHHHCCCCCCCCEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHCCCCCC
LNFSERIPATPAQAEAVRRAAQQPLSNKTLSIHENQSHANEGKRRHR
CCHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA