The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028277

Identifier: 238028277

GI number: 238028277

Start: 3103210

End: 3105354

Strand: Reverse

Name: 238028277

Synonym: bglu_1g27340

Alternate gene names: NA

Gene position: 3105354-3103210 (Counterclockwise)

Preceding gene: 238028278

Following gene: 238028276

Centisome position: 79.49

GC content: 62.42

Gene sequence:

>2145_bases
ATGGATTTCTTGATCAACTATCTCGATACGGCTCAGACGGTGAAGGACGTCATCCGCCGACTGGCTGCGCTGCTCCGACC
GCCGGAGAAGATTGGTACGACGGAGTGGGCGACAAATTACCGCCGGATGAGTGCGAAGGCGGCGGCGAAGCCCGGACGCT
ATAACCCCAACGTCACGCCGTGGGTTATCGGCATGCACGCTGCGCTAGACGATCCAAAGGTGCAGAAGGTCGTGTGCATG
AAGTCAGCGCAGGTCGCATGGACCGATGGCGTACTGCTCAACTACATCGGCAAGCGGATTGACGTTGATCCGTGCCCAAT
GATTGTGATGTTTCCAAAGGAGGGCGCTGCGAAAGATTTCAGCAACGAGAAATTCAAGCCCATGGTGGAGGTGACGCCGC
GCCTGCTATCAAAGTTGCCAGTTCAGGCTCGACGAGACAAAAACAACTTGTGGTATCACAAGACGTTTCCTCGTGGGTTC
TTGAAGTTCGTTACCTCGAATTCACCGACTGCGGTTAAGTCGACGCCGGCCCCCGTGGTGGCGGTGGAGGAGCCCGACGA
CGCGAACACCAACGTGCGCGAGCAGGGTGACTCGATCACTCTGCTAGAGGAGCGGACCAAGAGCTATTCGGACAGCCGGC
GCAAGGTGATCTTCGGCGGCACGCCAACGGTCGATGGCTTCTCGCGGATCCAGGCGGCGTATCACGCGTCGGACCAGCGC
GTGTTCCTCGTGCCTTGCCCTGATTGTGGCGAAGAGCACGAACTGGCATGGGAGAACGTTACCTGGACTGATGACGCTGA
AAAGCCGCATGAAGTGTTCGGGCGGGCGCGGCCTGATTCGGCCCGCTACATCTGTCCGCACTGCGGATCGTTGTGGGACG
ATGCCGCAAGGATCCGGGCGGTGCGCAAGGGGCGCTGGCTCGCAACGGCGCCGTTCCATGGTGTTGCGGGCTTCCGGCTG
AATGAGCTTGTGTCGCCGTTCCCCGGCTCGCGTATGCCGGAACTGGTCAAGAAGTGGCTCACGGCCGAAAAGGCGCTGCT
CGCGGGCGACGACACGAAAATGCGGTCGTTCGTGAACAACTCGCAGGGGCGGCCCTACAAGTACAAGAGCGACTTGCCCG
AGCTGGATGAGCTGGCCGAACGCGCGATGCCCTATGCGGCATTCACGGTGCCGGCAGGCGGCCTGCTGCTGACGCTGGGT
GTCGACGTGCAACACGATCGGATCGCGCTTGTTCTGCGCGCATGGGGGCGGGGCGAGGAAAGCTGGCTGGTCGTGTGGGA
CGAGATCCATGGCAACGTGCTGCATCAAGACGAGAATCCGCTCGAAGGTGGTGTATGGGGCGCGTTGACCGAGATGCTGA
TGAGTGGCTATCGCCACGAAACCGGCGGTGTGCTCCGGATCCGCGCGATGTCGATCGACTCGTCGGACGGCTCGACGTCG
GACGCCGTCTACAAGTACGTGCGAGCCGCGCGGCGAGTCGGCCTAAATGTCATGGCGATCAAGGGCAGCACCGATGCGAA
CGCGGAGGTTTTCAGCGTACCGAAGCAGTCGGTCGACTCGACACGGAACAACAGCAAGGCGGCGAAGTATGGCTTGCGCC
CATTCATGGTGGGCGTGAGCAAGGCGAAAGACCTGATTCTCGAGAATCGTTTCAAGCTGGACGGCGAGGGGCCGGGGCGC
ATGCACTGGTATGTCGGGGTGCGCTCCGACTACCTGTCGCAAGTCACGGCCGAGGTGAAGGTTCCGGGGCGCATCGGTTC
GAAGCGAGTCTGGCAGAAGAAAGCCGGTGCCCGAAACGAGGCGCTGGACTGCGAGGTCTACGCCCTGCACGCGGCTCGCA
GCGTGAAAACGCACATGATGACGGAAGCGCACTGGAGCGTGGAGCAGGTCCGCATCTCGCAGTCGTCGTTGTTCGAGGCA
GTGCCGATTCTGGAAGCGCTGCCGTCCGCGTTGCCGATCGAGGAAGTGCCGGATCCGCCGGCCGAGTTGGTGCCGTCCGA
GACGACGGAGCCGGCGCCTACGCAGCCGGTGCCTACTCAGCCGGTGCCGCAACAAATCAAACCCGCCGAAACCCCGCCAC
CGAGCGGGGTTTCGCGCATTCAGGGGCGTCGCATGGGCCGGTCGAGCTATCTCGGGCGGCGCTAG

Upstream 100 bases:

>100_bases
TTTCAGATTGAGCTGTTGGCCTTCCCGGACAGCTTGGTCCAAGAACTACGCACGTTGTACGGCGTGGACGTCGATGTCGA
ATGGCTGAATGAGCACATTT

Downstream 100 bases:

>100_bases
GAGGTAGAGCATGGCATACACGAGGCAGGATCTGGAGCGCGTCCAGTCGGCAATCGCCAAGGGCGAGCTGGAGGTGCAGT
ACGCCGACAGGCGCGTGCGT

Product: phage terminase large subunit (GpA)

Products: NA

Alternate protein names: Phage Terminase GpA; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; DNA Packaging Protein Of Prophage; Bacteriophage Terminase Large Subunit; Prophage LambdaW1 Terminase Large Subunit; DNA Packaging Protein Of Putative Prophage; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; DNA Packaging R; Large Subunit Of DNA Packaging Dimer; Phage Terminase GpA Family Protein; Terminase Gpa; Terminase Large Subunit Of Phage Lambda; DNA Packaging Protein

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MDFLINYLDTAQTVKDVIRRLAALLRPPEKIGTTEWATNYRRMSAKAAAKPGRYNPNVTPWVIGMHAALDDPKVQKVVCM
KSAQVAWTDGVLLNYIGKRIDVDPCPMIVMFPKEGAAKDFSNEKFKPMVEVTPRLLSKLPVQARRDKNNLWYHKTFPRGF
LKFVTSNSPTAVKSTPAPVVAVEEPDDANTNVREQGDSITLLEERTKSYSDSRRKVIFGGTPTVDGFSRIQAAYHASDQR
VFLVPCPDCGEEHELAWENVTWTDDAEKPHEVFGRARPDSARYICPHCGSLWDDAARIRAVRKGRWLATAPFHGVAGFRL
NELVSPFPGSRMPELVKKWLTAEKALLAGDDTKMRSFVNNSQGRPYKYKSDLPELDELAERAMPYAAFTVPAGGLLLTLG
VDVQHDRIALVLRAWGRGEESWLVVWDEIHGNVLHQDENPLEGGVWGALTEMLMSGYRHETGGVLRIRAMSIDSSDGSTS
DAVYKYVRAARRVGLNVMAIKGSTDANAEVFSVPKQSVDSTRNNSKAAKYGLRPFMVGVSKAKDLILENRFKLDGEGPGR
MHWYVGVRSDYLSQVTAEVKVPGRIGSKRVWQKKAGARNEALDCEVYALHAARSVKTHMMTEAHWSVEQVRISQSSLFEA
VPILEALPSALPIEEVPDPPAELVPSETTEPAPTQPVPTQPVPQQIKPAETPPPSGVSRIQGRRMGRSSYLGRR

Sequences:

>Translated_714_residues
MDFLINYLDTAQTVKDVIRRLAALLRPPEKIGTTEWATNYRRMSAKAAAKPGRYNPNVTPWVIGMHAALDDPKVQKVVCM
KSAQVAWTDGVLLNYIGKRIDVDPCPMIVMFPKEGAAKDFSNEKFKPMVEVTPRLLSKLPVQARRDKNNLWYHKTFPRGF
LKFVTSNSPTAVKSTPAPVVAVEEPDDANTNVREQGDSITLLEERTKSYSDSRRKVIFGGTPTVDGFSRIQAAYHASDQR
VFLVPCPDCGEEHELAWENVTWTDDAEKPHEVFGRARPDSARYICPHCGSLWDDAARIRAVRKGRWLATAPFHGVAGFRL
NELVSPFPGSRMPELVKKWLTAEKALLAGDDTKMRSFVNNSQGRPYKYKSDLPELDELAERAMPYAAFTVPAGGLLLTLG
VDVQHDRIALVLRAWGRGEESWLVVWDEIHGNVLHQDENPLEGGVWGALTEMLMSGYRHETGGVLRIRAMSIDSSDGSTS
DAVYKYVRAARRVGLNVMAIKGSTDANAEVFSVPKQSVDSTRNNSKAAKYGLRPFMVGVSKAKDLILENRFKLDGEGPGR
MHWYVGVRSDYLSQVTAEVKVPGRIGSKRVWQKKAGARNEALDCEVYALHAARSVKTHMMTEAHWSVEQVRISQSSLFEA
VPILEALPSALPIEEVPDPPAELVPSETTEPAPTQPVPTQPVPQQIKPAETPPPSGVSRIQGRRMGRSSYLGRR
>Mature_714_residues
MDFLINYLDTAQTVKDVIRRLAALLRPPEKIGTTEWATNYRRMSAKAAAKPGRYNPNVTPWVIGMHAALDDPKVQKVVCM
KSAQVAWTDGVLLNYIGKRIDVDPCPMIVMFPKEGAAKDFSNEKFKPMVEVTPRLLSKLPVQARRDKNNLWYHKTFPRGF
LKFVTSNSPTAVKSTPAPVVAVEEPDDANTNVREQGDSITLLEERTKSYSDSRRKVIFGGTPTVDGFSRIQAAYHASDQR
VFLVPCPDCGEEHELAWENVTWTDDAEKPHEVFGRARPDSARYICPHCGSLWDDAARIRAVRKGRWLATAPFHGVAGFRL
NELVSPFPGSRMPELVKKWLTAEKALLAGDDTKMRSFVNNSQGRPYKYKSDLPELDELAERAMPYAAFTVPAGGLLLTLG
VDVQHDRIALVLRAWGRGEESWLVVWDEIHGNVLHQDENPLEGGVWGALTEMLMSGYRHETGGVLRIRAMSIDSSDGSTS
DAVYKYVRAARRVGLNVMAIKGSTDANAEVFSVPKQSVDSTRNNSKAAKYGLRPFMVGVSKAKDLILENRFKLDGEGPGR
MHWYVGVRSDYLSQVTAEVKVPGRIGSKRVWQKKAGARNEALDCEVYALHAARSVKTHMMTEAHWSVEQVRISQSSLFEA
VPILEALPSALPIEEVPDPPAELVPSETTEPAPTQPVPTQPVPQQIKPAETPPPSGVSRIQGRRMGRSSYLGRR

Specific function: Unknown

COG id: COG5525

COG function: function code R; Bacteriophage tail assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79355; Mature: 79355

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLINYLDTAQTVKDVIRRLAALLRPPEKIGTTEWATNYRRMSAKAAAKPGRYNPNVTP
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
WVIGMHAALDDPKVQKVVCMKSAQVAWTDGVLLNYIGKRIDVDPCPMIVMFPKEGAAKDF
EEEEEEHHCCCCHHHHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
SNEKFKPMVEVTPRLLSKLPVQARRDKNNLWYHKTFPRGFLKFVTSNSPTAVKSTPAPVV
CCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHCCCCCCEEECCCCCEE
AVEEPDDANTNVREQGDSITLLEERTKSYSDSRRKVIFGGTPTVDGFSRIQAAYHASDQR
EEECCCCCCCCHHHCCCCEEEHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCE
VFLVPCPDCGEEHELAWENVTWTDDAEKPHEVFGRARPDSARYICPHCGSLWDDAARIRA
EEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHH
VRKGRWLATAPFHGVAGFRLNELVSPFPGSRMPELVKKWLTAEKALLAGDDTKMRSFVNN
HHCCCEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SQGRPYKYKSDLPELDELAERAMPYAAFTVPAGGLLLTLGVDVQHDRIALVLRAWGRGEE
CCCCCEECCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCC
SWLVVWDEIHGNVLHQDENPLEGGVWGALTEMLMSGYRHETGGVLRIRAMSIDSSDGSTS
CEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCH
DAVYKYVRAARRVGLNVMAIKGSTDANAEVFSVPKQSVDSTRNNSKAAKYGLRPFMVGVS
HHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCHHHHHHCCCCCHHHHHCCCHHHHHHH
KAKDLILENRFKLDGEGPGRMHWYVGVRSDYLSQVTAEVKVPGRIGSKRVWQKKAGARNE
HHHHHHHHCCEEECCCCCCEEEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCC
ALDCEVYALHAARSVKTHMMTEAHWSVEQVRISQSSLFEAVPILEALPSALPIEEVPDPP
CCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCCCC
AELVPSETTEPAPTQPVPTQPVPQQIKPAETPPPSGVSRIQGRRMGRSSYLGRR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCC
>Mature Secondary Structure
MDFLINYLDTAQTVKDVIRRLAALLRPPEKIGTTEWATNYRRMSAKAAAKPGRYNPNVTP
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
WVIGMHAALDDPKVQKVVCMKSAQVAWTDGVLLNYIGKRIDVDPCPMIVMFPKEGAAKDF
EEEEEEHHCCCCHHHHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
SNEKFKPMVEVTPRLLSKLPVQARRDKNNLWYHKTFPRGFLKFVTSNSPTAVKSTPAPVV
CCCCCCHHHHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHCCCCCCEEECCCCCEE
AVEEPDDANTNVREQGDSITLLEERTKSYSDSRRKVIFGGTPTVDGFSRIQAAYHASDQR
EEECCCCCCCCHHHCCCCEEEHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCE
VFLVPCPDCGEEHELAWENVTWTDDAEKPHEVFGRARPDSARYICPHCGSLWDDAARIRA
EEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHH
VRKGRWLATAPFHGVAGFRLNELVSPFPGSRMPELVKKWLTAEKALLAGDDTKMRSFVNN
HHCCCEEEECCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHC
SQGRPYKYKSDLPELDELAERAMPYAAFTVPAGGLLLTLGVDVQHDRIALVLRAWGRGEE
CCCCCEECCCCCCHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCC
SWLVVWDEIHGNVLHQDENPLEGGVWGALTEMLMSGYRHETGGVLRIRAMSIDSSDGSTS
CEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCH
DAVYKYVRAARRVGLNVMAIKGSTDANAEVFSVPKQSVDSTRNNSKAAKYGLRPFMVGVS
HHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCHHHHHHCCCCCHHHHHCCCHHHHHHH
KAKDLILENRFKLDGEGPGRMHWYVGVRSDYLSQVTAEVKVPGRIGSKRVWQKKAGARNE
HHHHHHHHCCEEECCCCCCEEEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHCCCCCC
ALDCEVYALHAARSVKTHMMTEAHWSVEQVRISQSSLFEAVPILEALPSALPIEEVPDPP
CCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCCCC
AELVPSETTEPAPTQPVPTQPVPQQIKPAETPPPSGVSRIQGRRMGRSSYLGRR
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA