Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028278
Identifier: 238028278
GI number: 238028278
Start: 3105191
End: 3105760
Strand: Reverse
Name: 238028278
Synonym: bglu_1g27350
Alternate gene names: NA
Gene position: 3105760-3105191 (Counterclockwise)
Preceding gene: 238028279
Following gene: 238028277
Centisome position: 79.5
GC content: 56.14
Gene sequence:
>570_bases ATGCCCACTCAATTACAGATTGCGGAACACCTTGACCTCGACCAGTCAGCGGTTTCGCGCTTCGTCGACAAGATCGGTCT TGATTACCGGGACGCGACGATTGATGACGTGCGTCTCGCATACATTCGGCATCTACGCGAGATGGCTGCTGGCAGAGGAA GTAATGGTGGCCTCGATCTCGTTGCAGAGAGAGCGAAGACAGAAATCGTCGAGCGCGAACTGAAGCTGCTGGCGCTTGCG GAGAAGAAGCGCGAGCTTGTCAACGCACAACAACTTGAACGTGCCTACGGCGAGATGGTGACTGCGTTTCAGATTGAGCT GTTGGCCTTCCCGGACAGCTTGGTCCAAGAACTACGCACGTTGTACGGCGTGGACGTCGATGTCGAATGGCTGAATGAGC ACATTTATGGATTTCTTGATCAACTATCTCGATACGGCTCAGACGGTGAAGGACGTCATCCGCCGACTGGCTGCGCTGCT CCGACCGCCGGAGAAGATTGGTACGACGGAGTGGGCGACAAATTACCGCCGGATGAGTGCGAAGGCGGCGGCGAAGCCCG GACGCTATAA
Upstream 100 bases:
>100_bases TGCTCAGAAAGTGGGCAGGGACCCCCCAGCAGGACGGACATGCGGGGGCTCGCACCCGCGTTTTTTCTCTACTGGTGAAA CTTCAAGGGGGGTCATATTC
Downstream 100 bases:
>100_bases CCCCAACGTCACGCCGTGGGTTATCGGCATGCACGCTGCGCTAGACGATCCAAAGGTGCAGAAGGTCGTGTGCATGAAGT CAGCGCAGGTCGCATGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPTQLQIAEHLDLDQSAVSRFVDKIGLDYRDATIDDVRLAYIRHLREMAAGRGSNGGLDLVAERAKTEIVERELKLLALA EKKRELVNAQQLERAYGEMVTAFQIELLAFPDSLVQELRTLYGVDVDVEWLNEHIYGFLDQLSRYGSDGEGRHPPTGCAA PTAGEDWYDGVGDKLPPDECEGGGEARTL
Sequences:
>Translated_189_residues MPTQLQIAEHLDLDQSAVSRFVDKIGLDYRDATIDDVRLAYIRHLREMAAGRGSNGGLDLVAERAKTEIVERELKLLALA EKKRELVNAQQLERAYGEMVTAFQIELLAFPDSLVQELRTLYGVDVDVEWLNEHIYGFLDQLSRYGSDGEGRHPPTGCAA PTAGEDWYDGVGDKLPPDECEGGGEARTL >Mature_188_residues PTQLQIAEHLDLDQSAVSRFVDKIGLDYRDATIDDVRLAYIRHLREMAAGRGSNGGLDLVAERAKTEIVERELKLLALAE KKRELVNAQQLERAYGEMVTAFQIELLAFPDSLVQELRTLYGVDVDVEWLNEHIYGFLDQLSRYGSDGEGRHPPTGCAAP TAGEDWYDGVGDKLPPDECEGGGEARTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21018; Mature: 20887
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTQLQIAEHLDLDQSAVSRFVDKIGLDYRDATIDDVRLAYIRHLREMAAGRGSNGGLDL CCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH VAERAKTEIVERELKLLALAEKKRELVNAQQLERAYGEMVTAFQIELLAFPDSLVQELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LYGVDVDVEWLNEHIYGFLDQLSRYGSDGEGRHPPTGCAAPTAGEDWYDGVGDKLPPDEC HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHC EGGGEARTL CCCCCCCCC >Mature Secondary Structure PTQLQIAEHLDLDQSAVSRFVDKIGLDYRDATIDDVRLAYIRHLREMAAGRGSNGGLDL CCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH VAERAKTEIVERELKLLALAEKKRELVNAQQLERAYGEMVTAFQIELLAFPDSLVQELRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LYGVDVDVEWLNEHIYGFLDQLSRYGSDGEGRHPPTGCAAPTAGEDWYDGVGDKLPPDEC HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHC EGGGEARTL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA