| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028268
Identifier: 238028268
GI number: 238028268
Start: 3096097
End: 3096834
Strand: Reverse
Name: 238028268
Synonym: bglu_1g27220
Alternate gene names: NA
Gene position: 3096834-3096097 (Counterclockwise)
Preceding gene: 238028269
Following gene: 238028267
Centisome position: 79.27
GC content: 48.24
Gene sequence:
>738_bases ATGAGTACTGTCGAAGAGAAGAAATCAGAGTACATGCGTCTGCGAGACTGGCCGTGGCCAGTAATCGCGTCTGTCATTGG ATTGTTGTTGTTGGGTATTGCATACTCATCCGGGGATGCATATTACAAAGCATTCATGAAGCAATTTTGGATCGAGGCTG AAGCGTTTCCAATAGATAAATCCAGGCATCTAATATTATCGGTGTGGGGAGGGTTGAATGCATCGATAGCGGTTCAGAAA TGGCTTGGAGAAAATTGGGAACGGTTGCTCTGGATGATTTTGGGTCTGTTGGCATACATTGCCGTCTGGGTGCTCTTTGA GAAGGGGGCAACGTGGCTTGCTGCTCGTTTGCGATTTCGAAAAGATGGTACTCCTAGGTCGTACACAATTTCACCACTTT TTTTGCGCTATCTCAGTTTCGTATTTTGGTGGGTATTCGGCGCCAGTACTTTTTTTGTTTTGAGTTGGGCAATTCCAGTG GTGCTTGCGATACCGTCGGGTATTGGCGAGGCGGTCGGTAATAGTATTGCTTCCGACTACAAGCATGATTTAGATCGTGG TTGCGCAAAATCGGAGGAGCGTTGTCAAATCCTCGTTAAGAACGGTCAGGAGGTGGCCCGTGGCTATGTGATTGCGCAAT CCCCTACGCGTATTGCGCTGTACTACGACGGTAACACTCGTCAAATACCGATGGATGGGATCGAAATGCGAACAGCGGAT CGAGCGCTTCCTCGTTGA
Upstream 100 bases:
>100_bases TCTGTAGTTTTCGACAGCTATCGAACTTTCAATTGTTGTGTATGTTCCTCGCGCGGCTGAGTGTCGCGCAAAGATACGTC ATAACAATGAGGGCCTATAG
Downstream 100 bases:
>100_bases TTCGAAGTGCCCACCGCAAAGTTACTTGCCCCGCCTAGTGCGGGGTTTTTCATTTCTGGAGATGCATATGTCGAAACAGG TAGACGTTTCGGTGCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSTVEEKKSEYMRLRDWPWPVIASVIGLLLLGIAYSSGDAYYKAFMKQFWIEAEAFPIDKSRHLILSVWGGLNASIAVQK WLGENWERLLWMILGLLAYIAVWVLFEKGATWLAARLRFRKDGTPRSYTISPLFLRYLSFVFWWVFGASTFFVLSWAIPV VLAIPSGIGEAVGNSIASDYKHDLDRGCAKSEERCQILVKNGQEVARGYVIAQSPTRIALYYDGNTRQIPMDGIEMRTAD RALPR
Sequences:
>Translated_245_residues MSTVEEKKSEYMRLRDWPWPVIASVIGLLLLGIAYSSGDAYYKAFMKQFWIEAEAFPIDKSRHLILSVWGGLNASIAVQK WLGENWERLLWMILGLLAYIAVWVLFEKGATWLAARLRFRKDGTPRSYTISPLFLRYLSFVFWWVFGASTFFVLSWAIPV VLAIPSGIGEAVGNSIASDYKHDLDRGCAKSEERCQILVKNGQEVARGYVIAQSPTRIALYYDGNTRQIPMDGIEMRTAD RALPR >Mature_244_residues STVEEKKSEYMRLRDWPWPVIASVIGLLLLGIAYSSGDAYYKAFMKQFWIEAEAFPIDKSRHLILSVWGGLNASIAVQKW LGENWERLLWMILGLLAYIAVWVLFEKGATWLAARLRFRKDGTPRSYTISPLFLRYLSFVFWWVFGASTFFVLSWAIPVV LAIPSGIGEAVGNSIASDYKHDLDRGCAKSEERCQILVKNGQEVARGYVIAQSPTRIALYYDGNTRQIPMDGIEMRTADR ALPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27927; Mature: 27796
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVEEKKSEYMRLRDWPWPVIASVIGLLLLGIAYSSGDAYYKAFMKQFWIEAEAFPIDK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC SRHLILSVWGGLNASIAVQKWLGENWERLLWMILGLLAYIAVWVLFEKGATWLAARLRFR CCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KDGTPRSYTISPLFLRYLSFVFWWVFGASTFFVLSWAIPVVLAIPSGIGEAVGNSIASDY CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KHDLDRGCAKSEERCQILVKNGQEVARGYVIAQSPTRIALYYDGNTRQIPMDGIEMRTAD HHHHHHHHCCCHHHHHHHHHCCHHHHHCEEEECCCCEEEEEECCCCEECCCCCCHHHHHH RALPR CCCCC >Mature Secondary Structure STVEEKKSEYMRLRDWPWPVIASVIGLLLLGIAYSSGDAYYKAFMKQFWIEAEAFPIDK CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC SRHLILSVWGGLNASIAVQKWLGENWERLLWMILGLLAYIAVWVLFEKGATWLAARLRFR CCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KDGTPRSYTISPLFLRYLSFVFWWVFGASTFFVLSWAIPVVLAIPSGIGEAVGNSIASDY CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KHDLDRGCAKSEERCQILVKNGQEVARGYVIAQSPTRIALYYDGNTRQIPMDGIEMRTAD HHHHHHHHCCCHHHHHHHHHCCHHHHHCEEEECCCCEEEEEECCCCEECCCCCCHHHHHH RALPR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA