| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028267
Identifier: 238028267
GI number: 238028267
Start: 3095832
End: 3096029
Strand: Reverse
Name: 238028267
Synonym: bglu_1g27210
Alternate gene names: NA
Gene position: 3096029-3095832 (Counterclockwise)
Preceding gene: 238028268
Following gene: 238028266
Centisome position: 79.25
GC content: 61.11
Gene sequence:
>198_bases ATGTCGAAACAGGTAGACGTTTCGGTGCCGGTCGTGTTCGTCGATACCGAGTATCGCAGCCGCGTCGTGGTGTTTCCTGA CGGCTCCTTCATTCCGGTGCTCGCCGGAAAGGCCGAGGTGACGGCGCCCGAGCACGTCGCCTATCTGGAGTCGAATCCGA GTTTCACGCGGATCCCGGCGAAGGAGCAGTCACGATGA
Upstream 100 bases:
>100_bases ATGCGAACAGCGGATCGAGCGCTTCCTCGTTGATTCGAAGTGCCCACCGCAAAGTTACTTGCCCCGCCTAGTGCGGGGTT TTTCATTTCTGGAGATGCAT
Downstream 100 bases:
>100_bases CCCTGGTCGGGATGTGCCGCCGCTCAGGGCGGCTGATCAGCGGCGTCGAACACCTGGTGCAGAGCATCGGCGACATCCTG AGCACGCGCAAGGGCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSKQVDVSVPVVFVDTEYRSRVVVFPDGSFIPVLAGKAEVTAPEHVAYLESNPSFTRIPAKEQSR
Sequences:
>Translated_65_residues MSKQVDVSVPVVFVDTEYRSRVVVFPDGSFIPVLAGKAEVTAPEHVAYLESNPSFTRIPAKEQSR >Mature_64_residues SKQVDVSVPVVFVDTEYRSRVVVFPDGSFIPVLAGKAEVTAPEHVAYLESNPSFTRIPAKEQSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7179; Mature: 7048
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQVDVSVPVVFVDTEYRSRVVVFPDGSFIPVLAGKAEVTAPEHVAYLESNPSFTRIPA CCCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCEEECCC KEQSR CCCCC >Mature Secondary Structure SKQVDVSVPVVFVDTEYRSRVVVFPDGSFIPVLAGKAEVTAPEHVAYLESNPSFTRIPA CCCCCEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCEEECCC KEQSR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA