| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028259
Identifier: 238028259
GI number: 238028259
Start: 3089168
End: 3089470
Strand: Reverse
Name: 238028259
Synonym: bglu_1g27130
Alternate gene names: NA
Gene position: 3089470-3089168 (Counterclockwise)
Preceding gene: 238028260
Following gene: 238028258
Centisome position: 79.09
GC content: 63.04
Gene sequence:
>303_bases ATGGACAAGGTCACCGTCACGCTGGCTTACCCGATCAAGCTGAACGGCGTCGAGTGCGACAAATTCACGATGCGCCGCCC GAAGGTGCGCGACATGCGCGGCGCGCAAAAACTCGCACCGAAAGACGAGGAGCAACAGGAGCTGATCCTGTTCGCTTCGC TCGCCGAGGTGTCGCCGGACGACATCGAGGAGATGGACATGGCCGACTACGCGCGCGTGCAGGACGCCTACTACTCCTTT CGATCCGTACGCCAAGACGGACGCCAAGACGCTGAAGGCGCTGGCGAGGCGGCTCGCGCTTGA
Upstream 100 bases:
>100_bases TAAGGCGCTCGGCATGTAGCGCGGCCGGCTGGTCACGAGCAAAGTTACTTTTCACTCAACGGCGGGCCGATGGCTCGCCG TTTCTCTTTGAGGACACGAT
Downstream 100 bases:
>100_bases GTTTGGCATGTCGCCTGCCTCGATTGACGACATGACGATCGACGACATGATCTGGTGGTTGACTGACTGAGAGGTGCGGA CATGGCAAAGGATATCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MDKVTVTLAYPIKLNGVECDKFTMRRPKVRDMRGAQKLAPKDEEQQELILFASLAEVSPDDIEEMDMADYARVQDAYYSF RSVRQDGRQDAEGAGEAARA
Sequences:
>Translated_100_residues MDKVTVTLAYPIKLNGVECDKFTMRRPKVRDMRGAQKLAPKDEEQQELILFASLAEVSPDDIEEMDMADYARVQDAYYSF RSVRQDGRQDAEGAGEAARA >Mature_100_residues MDKVTVTLAYPIKLNGVECDKFTMRRPKVRDMRGAQKLAPKDEEQQELILFASLAEVSPDDIEEMDMADYARVQDAYYSF RSVRQDGRQDAEGAGEAARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11319; Mature: 11319
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKVTVTLAYPIKLNGVECDKFTMRRPKVRDMRGAQKLAPKDEEQQELILFASLAEVSPD CCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCC DIEEMDMADYARVQDAYYSFRSVRQDGRQDAEGAGEAARA CHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDKVTVTLAYPIKLNGVECDKFTMRRPKVRDMRGAQKLAPKDEEQQELILFASLAEVSPD CCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHCCCC DIEEMDMADYARVQDAYYSFRSVRQDGRQDAEGAGEAARA CHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA