| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028260
Identifier: 238028260
GI number: 238028260
Start: 3089552
End: 3090055
Strand: Reverse
Name: 238028260
Synonym: bglu_1g27140
Alternate gene names: NA
Gene position: 3090055-3089552 (Counterclockwise)
Preceding gene: 238028261
Following gene: 238028259
Centisome position: 79.1
GC content: 62.5
Gene sequence:
>504_bases ATGGTTCCGGAAACTCTGTACAACTGCTCGGTGGCGGTGGACGGTCGCGGGTACGCTGGCCGGGCGACGGGCATGACGCC GCCGAAACTGAAACTCAAGACCGACGACTACCGCGCGGGCGGCATGGACGCGCCGTCCAAGGTCGACCAGGGCATGGAAG CGCTCGAAGCGTCGTTCGCCATGGCGTCCATGGAACACGACGTGCTGAAGTATTTCGGCATCCTCGACGGGAACGCGTTC AGCGGCAATTTCCGCGCGGCTTTCAAGGACCACTACGGCAAGGTCAAGTATGTCGGGGCGTTCTTTCGCGGCAAGCTGAC CGAGGTGGATCCGGGCGAGTGGAAGCCGGGCGAGAAGGCGGAAACGAAGTACACCATCGCTGTCGATTACTACCGGATGG AGATCGACGGGGCCGTGGTTCACGAGATCGATGTGTTCGCGTGCAAGCGCGTGGTCAATGGCGTCGACCAACTGGCCGAG GTGCGTAAGGCGCTCGGCATGTAG
Upstream 100 bases:
>100_bases CTTTACCGATGTACCGCCGGCCGAAAACCCAATTTTCCGCTTCGAGGTCACCAATCAGTGGATGACCGAAGTGCTCGATA ACCAGGTCTAAGGGGGAAAG
Downstream 100 bases:
>100_bases CGCGGCCGGCTGGTCACGAGCAAAGTTACTTTTCACTCAACGGCGGGCCGATGGCTCGCCGTTTCTCTTTGAGGACACGA TATGGACAAGGTCACCGTCA
Product: phage major tail tube protein
Products: NA
Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Phage-Related Tail Tube Protein; Contractile Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Phage Tail Fiber Component; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Phage Tail Tube-Like Protein; Pyocin R2_PP Tail Tube Protein; Tail Tube Protein Prophage
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFAMASMEHDVLKYFGILDGNAF SGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKAETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAE VRKALGM
Sequences:
>Translated_167_residues MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFAMASMEHDVLKYFGILDGNAF SGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKAETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAE VRKALGM >Mature_167_residues MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFAMASMEHDVLKYFGILDGNAF SGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKAETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAE VRKALGM
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18351; Mature: 18351
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFA CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH MASMEHDVLKYFGILDGNAFSGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKA HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCEEEEEHHHCCCCCCCCCCCCCCCCCC ETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAEVRKALGM CCEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFA CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH MASMEHDVLKYFGILDGNAFSGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKA HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCEEEEEHHHCCCCCCCCCCCCCCCCCC ETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAEVRKALGM CCEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA