Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028260

Identifier: 238028260

GI number: 238028260

Start: 3089552

End: 3090055

Strand: Reverse

Name: 238028260

Synonym: bglu_1g27140

Alternate gene names: NA

Gene position: 3090055-3089552 (Counterclockwise)

Preceding gene: 238028261

Following gene: 238028259

Centisome position: 79.1

GC content: 62.5

Gene sequence:

>504_bases
ATGGTTCCGGAAACTCTGTACAACTGCTCGGTGGCGGTGGACGGTCGCGGGTACGCTGGCCGGGCGACGGGCATGACGCC
GCCGAAACTGAAACTCAAGACCGACGACTACCGCGCGGGCGGCATGGACGCGCCGTCCAAGGTCGACCAGGGCATGGAAG
CGCTCGAAGCGTCGTTCGCCATGGCGTCCATGGAACACGACGTGCTGAAGTATTTCGGCATCCTCGACGGGAACGCGTTC
AGCGGCAATTTCCGCGCGGCTTTCAAGGACCACTACGGCAAGGTCAAGTATGTCGGGGCGTTCTTTCGCGGCAAGCTGAC
CGAGGTGGATCCGGGCGAGTGGAAGCCGGGCGAGAAGGCGGAAACGAAGTACACCATCGCTGTCGATTACTACCGGATGG
AGATCGACGGGGCCGTGGTTCACGAGATCGATGTGTTCGCGTGCAAGCGCGTGGTCAATGGCGTCGACCAACTGGCCGAG
GTGCGTAAGGCGCTCGGCATGTAG

Upstream 100 bases:

>100_bases
CTTTACCGATGTACCGCCGGCCGAAAACCCAATTTTCCGCTTCGAGGTCACCAATCAGTGGATGACCGAAGTGCTCGATA
ACCAGGTCTAAGGGGGAAAG

Downstream 100 bases:

>100_bases
CGCGGCCGGCTGGTCACGAGCAAAGTTACTTTTCACTCAACGGCGGGCCGATGGCTCGCCGTTTCTCTTTGAGGACACGA
TATGGACAAGGTCACCGTCA

Product: phage major tail tube protein

Products: NA

Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Phage-Related Tail Tube Protein; Contractile Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Phage Tail Fiber Component; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Phage Tail Tube-Like Protein; Pyocin R2_PP Tail Tube Protein; Tail Tube Protein Prophage

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFAMASMEHDVLKYFGILDGNAF
SGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKAETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAE
VRKALGM

Sequences:

>Translated_167_residues
MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFAMASMEHDVLKYFGILDGNAF
SGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKAETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAE
VRKALGM
>Mature_167_residues
MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFAMASMEHDVLKYFGILDGNAF
SGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKAETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAE
VRKALGM

Specific function: Unknown

COG id: COG3498

COG function: function code R; Phage tail tube protein FII

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18351; Mature: 18351

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
MASMEHDVLKYFGILDGNAFSGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKA
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCEEEEEHHHCCCCCCCCCCCCCCCCCC
ETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAEVRKALGM
CCEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVPETLYNCSVAVDGRGYAGRATGMTPPKLKLKTDDYRAGGMDAPSKVDQGMEALEASFA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
MASMEHDVLKYFGILDGNAFSGNFRAAFKDHYGKVKYVGAFFRGKLTEVDPGEWKPGEKA
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHCCCCEEEEEHHHCCCCCCCCCCCCCCCCCC
ETKYTIAVDYYRMEIDGAVVHEIDVFACKRVVNGVDQLAEVRKALGM
CCEEEEEEEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA