| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028254
Identifier: 238028254
GI number: 238028254
Start: 3083661
End: 3084710
Strand: Reverse
Name: 238028254
Synonym: bglu_1g27080
Alternate gene names: NA
Gene position: 3084710-3083661 (Counterclockwise)
Preceding gene: 238028255
Following gene: 238028253
Centisome position: 78.96
GC content: 65.24
Gene sequence:
>1050_bases ATGGAAGCGATCTTTCAGATTATCGCGAACGGCGACGACGTCACCAAGGTGATTCAGGACCGGGTCATGGAGATCCGGAC CGTCGACAAGCCTGGCCTGGATGCGGACGAATGCACGATCACGCTCGACGATCGCGACGGCCGGATCCGATTCCCGCCCA AGGGCGCGACGGTCAAGGTGTCGCTGGGATGGGAGGGGCAGGGGCTGTCGATGCTGGGCGAGTATGCCGTCGACGAGGTC GGGCTGCGTGGGCCGCCGGCCAGCGTGGTGTTTCGCGGCAAGCCTGCGAACATGCGGGCGACGTCGAAGACGCAGCGCTA CGGGAGCTGGTCGAACGTGCGGCTGGCCGACATCGTCGGCGATGTCGCGCGACGCAACAAGTGGTCGGCCGCGTGCGATG TCAACGTGGTGGTGCCTCGGATCGACCAGTTTGGCGAAAGCGATCTGCATTTCGTGACGCGACTCGCCCGGCAGTATGGA GCGACGGCGACGGTCAAGGCCGGCAAGCTGATCGTGCTGCCCCGAGGCGGCGGCAAGAGCGCGAGCGGCAAGCCGTTGCC GGTGGTGACCCTGACGCCCGAGCTGCTGCTCGACTATGACATCAATTTCCCCGATCGCGCGAGCTTCGCGGCGGTCCGCA CCAAGGTCCACGATCGCAAGACGGGGAGGAAAATCGATCTGACGATTCCCAATCCGGATGCGCCGCAAGGGGCGGCCGCG GTTCATACCGAGCGGCACGCCTTCGCCAGTCCGCAGGCGGCGAAGGCGGCCGCCACGTCGAGGCTCGAAACGCTCAATCG GCACACGTCGGCGAGCCGCCTGACGATGCGCGGCCGGGCGGACCTGTCCGCCGAAAAGACGATCGCGCTGAAAGGGTTCA AAGAGGGAGTCGACGGAGAGTTTCTGATCGAGGCGGTCGAGCACACGTTCGCCTCGCGGGGCTGGATCACGGTGGTGACG TTGAATGGAGGAAACAAGGGCAAGGCGAAGGTGGGGCACAAGAAGAAGTCGGGCAAGAAAATCGATCTGGTGGTGCCGGC GCCGACGTAA
Upstream 100 bases:
>100_bases CGCGAGACCGCAGCCGTTCGCCTCGGGCGTCGAGATTGTCATGCCGGATATCGAGGCGCCGCGCGACGAAACCGTGTCGC TTTGGACATAGCGAGGCGCG
Downstream 100 bases:
>100_bases CGCGCCACACGAGAACGATGCAGGCCGCTCACGGGCAACCGGAGCGGCCTTTCTTTTTTCAACGGGGGTGGGATGGGTGA CGAGAAGCAGGAGGGGCTGG
Product: phage late control D family protein
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Bacteriophage Regulatory Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Late Control Gene D Protein; Regulator Of Late Gene Expression; Bacteriophage Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Fels-2 Prophage Protein; Phage Late Control; Phage Protein; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Phage Late Control D Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Control Protein For Phage Late Genes Expression; Phage Regulator; Phage Protein D-Like; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Late Gene Regulator
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKVSLGWEGQGLSMLGEYAVDEV GLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVGDVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYG ATATVKAGKLIVLPRGGGKSASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGEFLIEAVEHTFASRGWITVVT LNGGNKGKAKVGHKKKSGKKIDLVVPAPT
Sequences:
>Translated_349_residues MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKVSLGWEGQGLSMLGEYAVDEV GLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVGDVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYG ATATVKAGKLIVLPRGGGKSASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGEFLIEAVEHTFASRGWITVVT LNGGNKGKAKVGHKKKSGKKIDLVVPAPT >Mature_349_residues MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKVSLGWEGQGLSMLGEYAVDEV GLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVGDVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYG ATATVKAGKLIVLPRGGGKSASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGEFLIEAVEHTFASRGWITVVT LNGGNKGKAKVGHKKKSGKKIDLVVPAPT
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37637; Mature: 37637
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKV CHHHHEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEEE SLGWEGQGLSMLGEYAVDEVGLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVG EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHH DVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYGATATVKAGKLIVLPRGGGKS HHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCC ASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA CCCCCEEEEEECHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEE VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGE EECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHH FLIEAVEHTFASRGWITVVTLNGGNKGKAKVGHKKKSGKKIDLVVPAPT HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MEAIFQIIANGDDVTKVIQDRVMEIRTVDKPGLDADECTITLDDRDGRIRFPPKGATVKV CHHHHEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEEE SLGWEGQGLSMLGEYAVDEVGLRGPPASVVFRGKPANMRATSKTQRYGSWSNVRLADIVG EECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHH DVARRNKWSAACDVNVVVPRIDQFGESDLHFVTRLARQYGATATVKAGKLIVLPRGGGKS HHHHCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHHHHHCCEEEEECCEEEEEECCCCCC ASGKPLPVVTLTPELLLDYDINFPDRASFAAVRTKVHDRKTGRKIDLTIPNPDAPQGAAA CCCCCEEEEEECHHHEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEE VHTERHAFASPQAAKAAATSRLETLNRHTSASRLTMRGRADLSAEKTIALKGFKEGVDGE EECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCCHH FLIEAVEHTFASRGWITVVTLNGGNKGKAKVGHKKKSGKKIDLVVPAPT HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA