| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028253
Identifier: 238028253
GI number: 238028253
Start: 3082576
End: 3083142
Strand: Reverse
Name: 238028253
Synonym: bglu_1g27070
Alternate gene names: NA
Gene position: 3083142-3082576 (Counterclockwise)
Preceding gene: 238028254
Following gene: 238028252
Centisome position: 78.92
GC content: 65.96
Gene sequence:
>567_bases ATGAATGTCACGGCGAAGATCGACGCGCTGATCGGGCGCGAGGGCGGTTTTTCGAACGATCCGAGCGACCGGGGGAATTG GTATCTCGGCAAGCTGGAGGGGACGATGTGGGGCGTGACGGCCGCCGAGGCGCGGGCGAACGGCTACCTCGGCGCGATGA AGGACATGCCGCGCGCAACGGCCATCGCGATCTACGCGTCGCGCTACTGGTCGCGACCGAAATTCGACCAGATCGACGCG ATCTCGACGACGCTGGCCGAGAAGCTGTTCGATATCGGCGTGAACGCGGGGCCGGCAACCGGGGTGAAGTTCATGCAGCG GGCGCTCAACGTGTTGAACCAGGGCGGCAAGGCGTTCCCGGACATCGCGGCCGATGGCGGGATCGGCCCGATGACCCTCG CGGCGCTGAAGGCGTTCCTGCAGCAGCGAGGGGCGGACGGGCATCGCGTGCTGTACGGCATGATTGCCGCGCAGCAGTCG GTGTTCTATATCGAGCTGGCCGAGCGTCGCCCGGAGAACGAGGCGTTCGAGTATGGCTGGCAACTCAACCGTGCGCTGGG AGTGTGA
Upstream 100 bases:
>100_bases TCTGGGTCTTCACGCACGTCAACGAGGCGGACGTGCTCAATCGACTGCAACAGCAGCGTATCGAAACGCTGGAACTGGCC ATTGGCCGAGGGGGAAAGCC
Downstream 100 bases:
>100_bases GCATGCTCGACATTTTGAAAACGGTGGCGCCCTGGCTCGTCACCGCATTGACGGGGGGCGTGCCGGGTGTGGCGGCAATG GCCGCCTCGGCGATCGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRATAIAIYASRYWSRPKFDQIDA ISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFPDIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQS VFYIELAERRPENEAFEYGWQLNRALGV
Sequences:
>Translated_188_residues MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRATAIAIYASRYWSRPKFDQIDA ISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFPDIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQS VFYIELAERRPENEAFEYGWQLNRALGV >Mature_188_residues MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRATAIAIYASRYWSRPKFDQIDA ISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFPDIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQS VFYIELAERRPENEAFEYGWQLNRALGV
Specific function: Unknown
COG id: COG3926
COG function: function code R; Putative secretion activating protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20394; Mature: 20394
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRAT CCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECEEHHHHHCCCCCHHHHCCCCHH AIAIYASRYWSRPKFDQIDAISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC DIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQSVFYIELAERRPENEAFEYGW CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH QLNRALGV HHHHHHCC >Mature Secondary Structure MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRAT CCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECEEHHHHHCCCCCHHHHCCCCHH AIAIYASRYWSRPKFDQIDAISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC DIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQSVFYIELAERRPENEAFEYGW CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH QLNRALGV HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA