Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028253

Identifier: 238028253

GI number: 238028253

Start: 3082576

End: 3083142

Strand: Reverse

Name: 238028253

Synonym: bglu_1g27070

Alternate gene names: NA

Gene position: 3083142-3082576 (Counterclockwise)

Preceding gene: 238028254

Following gene: 238028252

Centisome position: 78.92

GC content: 65.96

Gene sequence:

>567_bases
ATGAATGTCACGGCGAAGATCGACGCGCTGATCGGGCGCGAGGGCGGTTTTTCGAACGATCCGAGCGACCGGGGGAATTG
GTATCTCGGCAAGCTGGAGGGGACGATGTGGGGCGTGACGGCCGCCGAGGCGCGGGCGAACGGCTACCTCGGCGCGATGA
AGGACATGCCGCGCGCAACGGCCATCGCGATCTACGCGTCGCGCTACTGGTCGCGACCGAAATTCGACCAGATCGACGCG
ATCTCGACGACGCTGGCCGAGAAGCTGTTCGATATCGGCGTGAACGCGGGGCCGGCAACCGGGGTGAAGTTCATGCAGCG
GGCGCTCAACGTGTTGAACCAGGGCGGCAAGGCGTTCCCGGACATCGCGGCCGATGGCGGGATCGGCCCGATGACCCTCG
CGGCGCTGAAGGCGTTCCTGCAGCAGCGAGGGGCGGACGGGCATCGCGTGCTGTACGGCATGATTGCCGCGCAGCAGTCG
GTGTTCTATATCGAGCTGGCCGAGCGTCGCCCGGAGAACGAGGCGTTCGAGTATGGCTGGCAACTCAACCGTGCGCTGGG
AGTGTGA

Upstream 100 bases:

>100_bases
TCTGGGTCTTCACGCACGTCAACGAGGCGGACGTGCTCAATCGACTGCAACAGCAGCGTATCGAAACGCTGGAACTGGCC
ATTGGCCGAGGGGGAAAGCC

Downstream 100 bases:

>100_bases
GCATGCTCGACATTTTGAAAACGGTGGCGCCCTGGCTCGTCACCGCATTGACGGGGGGCGTGCCGGGTGTGGCGGCAATG
GCCGCCTCGGCGATCGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRATAIAIYASRYWSRPKFDQIDA
ISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFPDIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQS
VFYIELAERRPENEAFEYGWQLNRALGV

Sequences:

>Translated_188_residues
MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRATAIAIYASRYWSRPKFDQIDA
ISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFPDIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQS
VFYIELAERRPENEAFEYGWQLNRALGV
>Mature_188_residues
MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRATAIAIYASRYWSRPKFDQIDA
ISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFPDIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQS
VFYIELAERRPENEAFEYGWQLNRALGV

Specific function: Unknown

COG id: COG3926

COG function: function code R; Putative secretion activating protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20394; Mature: 20394

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRAT
CCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECEEHHHHHCCCCCHHHHCCCCHH
AIAIYASRYWSRPKFDQIDAISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
DIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQSVFYIELAERRPENEAFEYGW
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH
QLNRALGV
HHHHHHCC
>Mature Secondary Structure
MNVTAKIDALIGREGGFSNDPSDRGNWYLGKLEGTMWGVTAAEARANGYLGAMKDMPRAT
CCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEECEEHHHHHCCCCCHHHHCCCCHH
AIAIYASRYWSRPKFDQIDAISTTLAEKLFDIGVNAGPATGVKFMQRALNVLNQGGKAFP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
DIAADGGIGPMTLAALKAFLQQRGADGHRVLYGMIAAQQSVFYIELAERRPENEAFEYGW
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH
QLNRALGV
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA