Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028242
Identifier: 238028242
GI number: 238028242
Start: 3074498
End: 3075421
Strand: Direct
Name: 238028242
Synonym: bglu_1g26960
Alternate gene names: NA
Gene position: 3074498-3075421 (Clockwise)
Preceding gene: 238028236
Following gene: 238028243
Centisome position: 78.7
GC content: 56.28
Gene sequence:
>924_bases GTGTTTCAGACTCCCTACGGTCCATTCGACGGAAACAGCTGGGAACGGCTATGTCAGCTCGTCTTTAAGCGCAAGTTCAC GGACGACGGCTACACCCACATTCCGGCTACTCCCGGCGACTACGGTCTAGAAGGTTTCACTAAGACAACAGGTTATGGAT ATCAGTGCTACTGCCCAGATAAGGTCTATCCGGCGAAAGACCTCTATGAGAAGCAGCGGGACAAAATCACGACAGACCTG AAGAAGCTTCAGACCAACACAACCGAGCTGACGAGGGTGCTGGGAACGACCAAGCTGCGGCGATGGCACTTGGTGACGCC AACCATCGCTCACAACGACCTCATCAAGCATGCGCAGGCGAAGGAGGCCGAGGTTCGCGGGTGGAACCTGTCAATTTTGG CCCCGGACTTCCAAGTGCTGGTCCACGACGCTGACCACTACGCGACAGAGATTCAGGAGATGAAGCTAGCCGTCGGTCAG GCACTGGATTTCGGCAGCCTGCCTGCGGTCTTGCCCGACCTGAACGGTAATTCCGAGATCTACGAGAAAAACATCATGCG CAAGACGCGGGCGCGACTTGCGCAGGCTCCGGCCGACAAGCTGGAAAGTCGCGTTACTCGCCTTTACGCGAAGACTCTGC GAGAGTTCCTTGACCACGGCTCCTACCTAAAACGGATAAACGACACGGCACCAACCGTGCATTCAAGACTTGCGCGGCTC ATAAACGGGTACGAAGCTGAAGTCGATGAAAGGTGCTTTACCTGGGAAGGAACACCCCAAGAGCTGACCGACAAGATTCG CGACGGCCTTACCGCGCGCATAGTCAGGGAGCTAGCCCCCTCTATTGGGGAAACCGACGCCGCAGACATCGCCCGCATGA TCGTCGCAAGGTGGATTGCAGTTTGTGAGGTTGACTATGACTGA
Upstream 100 bases:
>100_bases CAGACGGCAGCCGCCAAACGACATCACTACTTTTCCCGAAAGCAGTGATCATTGGTATCTGCGTGCCGGATCTCGGCTAA GCGATCACGGTAACTCAATC
Downstream 100 bases:
>100_bases AGCCGTGGCCTTCGAGTCTAGACGTCTGCGCTTCGTCCGACGGCCGTCTCCAGTGCTGGTGGAACACCGGCCGTGTTGAT GTCCGCACAGAACTGACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MFQTPYGPFDGNSWERLCQLVFKRKFTDDGYTHIPATPGDYGLEGFTKTTGYGYQCYCPDKVYPAKDLYEKQRDKITTDL KKLQTNTTELTRVLGTTKLRRWHLVTPTIAHNDLIKHAQAKEAEVRGWNLSILAPDFQVLVHDADHYATEIQEMKLAVGQ ALDFGSLPAVLPDLNGNSEIYEKNIMRKTRARLAQAPADKLESRVTRLYAKTLREFLDHGSYLKRINDTAPTVHSRLARL INGYEAEVDERCFTWEGTPQELTDKIRDGLTARIVRELAPSIGETDAADIARMIVARWIAVCEVDYD
Sequences:
>Translated_307_residues MFQTPYGPFDGNSWERLCQLVFKRKFTDDGYTHIPATPGDYGLEGFTKTTGYGYQCYCPDKVYPAKDLYEKQRDKITTDL KKLQTNTTELTRVLGTTKLRRWHLVTPTIAHNDLIKHAQAKEAEVRGWNLSILAPDFQVLVHDADHYATEIQEMKLAVGQ ALDFGSLPAVLPDLNGNSEIYEKNIMRKTRARLAQAPADKLESRVTRLYAKTLREFLDHGSYLKRINDTAPTVHSRLARL INGYEAEVDERCFTWEGTPQELTDKIRDGLTARIVRELAPSIGETDAADIARMIVARWIAVCEVDYD >Mature_307_residues MFQTPYGPFDGNSWERLCQLVFKRKFTDDGYTHIPATPGDYGLEGFTKTTGYGYQCYCPDKVYPAKDLYEKQRDKITTDL KKLQTNTTELTRVLGTTKLRRWHLVTPTIAHNDLIKHAQAKEAEVRGWNLSILAPDFQVLVHDADHYATEIQEMKLAVGQ ALDFGSLPAVLPDLNGNSEIYEKNIMRKTRARLAQAPADKLESRVTRLYAKTLREFLDHGSYLKRINDTAPTVHSRLARL INGYEAEVDERCFTWEGTPQELTDKIRDGLTARIVRELAPSIGETDAADIARMIVARWIAVCEVDYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34973; Mature: 34973
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQTPYGPFDGNSWERLCQLVFKRKFTDDGYTHIPATPGDYGLEGFTKTTGYGYQCYCPD CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEECCCCCEEEECCC KVYPAKDLYEKQRDKITTDLKKLQTNTTELTRVLGTTKLRRWHLVTPTIAHNDLIKHAQA CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH KEAEVRGWNLSILAPDFQVLVHDADHYATEIQEMKLAVGQALDFGSLPAVLPDLNGNSEI HHHHCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH YEKNIMRKTRARLAQAPADKLESRVTRLYAKTLREFLDHGSYLKRINDTAPTVHSRLARL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHH INGYEAEVDERCFTWEGTPQELTDKIRDGLTARIVRELAPSIGETDAADIARMIVARWIA HCCHHHHHHCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VCEVDYD HHCCCCC >Mature Secondary Structure MFQTPYGPFDGNSWERLCQLVFKRKFTDDGYTHIPATPGDYGLEGFTKTTGYGYQCYCPD CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCEECCCCCEEEECCC KVYPAKDLYEKQRDKITTDLKKLQTNTTELTRVLGTTKLRRWHLVTPTIAHNDLIKHAQA CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHH KEAEVRGWNLSILAPDFQVLVHDADHYATEIQEMKLAVGQALDFGSLPAVLPDLNGNSEI HHHHCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH YEKNIMRKTRARLAQAPADKLESRVTRLYAKTLREFLDHGSYLKRINDTAPTVHSRLARL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHH INGYEAEVDERCFTWEGTPQELTDKIRDGLTARIVRELAPSIGETDAADIARMIVARWIA HCCHHHHHHCCEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH VCEVDYD HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA