Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is lysN [H]
Identifier: 238028233
GI number: 238028233
Start: 3057966
End: 3059177
Strand: Direct
Name: lysN [H]
Synonym: bglu_1g26860
Alternate gene names: 238028233
Gene position: 3057966-3059177 (Clockwise)
Preceding gene: 238028232
Following gene: 238028234
Centisome position: 78.28
GC content: 71.62
Gene sequence:
>1212_bases GTGTTTCGCCTGACCCACCGAGGAAACGAGATGAACCCGAGCGACCTGCCCCAACCGAACTGGCTCCTGTCCGAGCGCGC CCGCAAGCTGACCAGCTCCGCGATCCGCGAGATCCTGAAGGTCACCGAGCGCCCGGAAGTCATTTCGTTCGCGGGCGGCC TGCCGGCGCCGGCCACCTTCCCGGCCGAACGCATGCGCGAGGCGGCCGAGCGCGTGCTGCGCGACGCGCCGGGCGCGGCG CTCCAATACAGCGCGACGGAGGGCTTCCTGCCGCTGCGCGAGTGGATCGCCGAGCGCTACCGCGTGCGCCTCACGCAGGT GCTCATCACCACCGGCTCGCAGCAGGCGCTCGACCTGCTCGGCAAGGTGCTGATCGATCCGGGCAGCCGCGTGCTGGTGG AGACGCCCACCTACCTCGGCGCGCTGCAGTCGTTCTCGCTCTACGAGCCGGCCTACGTGCAGGTGCCGAGCGACGCGGCG GGGCTCGTACCCGAGGCGCTCGTGCCGGCGCTCACGCGCGAAGCGCGCCTGCTCTACGCGCAGCCGAATTTCCAGAACCC GACCGGGCGCCGCATGCCGGTGGCGCGCCGCGAGGCGCTCGCCGCGTTCGCGCGCGAGAGCGCGTTCCCGGTGATCGAGG ACGACCCCTACGGCGCGCTCAACTACCGGGGCGAGCCGCTGCCGACCCTGCTGTCGATGGCGCCCGAGCACATCGTGCAT CTCGGCACGTTCTCGAAGGTGCTGGCGCCGGGCCTGCGGATCGGCTACGTGATCGCCCCCGAGGCGCTGCACGCCAAGCT CGTGCAGGCCAAGCAGGCCACCGACCTGCACACGCCGTCGCTCACGCAGCGCATCGCCCACGAGGTACTCCGCGACGACT TCCTCGACACGCACATCCCGGCCATCCGCACGCTCTATGCCGCACAATGCGAGGCGATGCTCGGCTCGCTCGCGCGCCAC ATGCCCGAAGGCGTGAGCTGGAACCGCCCCGAGGGCGGCATGTTCATCTGGGTGCAGCTGCCCAACGGGATCGACAGCAT GGCGCTGCTCGAGGCCGCGATCGCGCAGCACGTGGCGTTCGTGCCCGGCGCGCCGTTCTTCGCCGACGAGGCGCAGGCCA GCACGCTGCGCCTGTCGTTCGTGACGGTGCCGCCCGAGCAGATCGAGCAGGGCGTCGCGCGCCTCGGCCAGCTGCTGCGC GAGCGCGTCTGA
Upstream 100 bases:
>100_bases GCCACCGTCGTGCTGGGACGCCGCGCCGGCGTGCGCACCCTGCCGCAGCCCGCTCGCGCGGGCTGAGCCCGCGAGCGATA ATTCACACCGGTTTCGATGA
Downstream 100 bases:
>100_bases TGCGGCGCGCCGGGCCTCGCCCCGGCGCGCACCGATTGTTCCCTACCACGAGGAAATACCACTGATGGCAAACGTCTACG ACAAACTGAAGGCACTCGGC
Product: aminotransferase family protein
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMREAAERVLRDAPGAA LQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLLGKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAA GLVPEALVPALTREARLLYAQPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIPAIRTLYAAQCEAMLGSLARH MPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAFVPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLR ERV
Sequences:
>Translated_403_residues MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMREAAERVLRDAPGAA LQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLLGKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAA GLVPEALVPALTREARLLYAQPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIPAIRTLYAAQCEAMLGSLARH MPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAFVPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLR ERV >Mature_403_residues MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMREAAERVLRDAPGAA LQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLLGKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAA GLVPEALVPALTREARLLYAQPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIPAIRTLYAAQCEAMLGSLARH MPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAFVPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLR ERV
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=416, Percent_Identity=29.8076923076923, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI33469970, Length=416, Percent_Identity=29.8076923076923, Blast_Score=187, Evalue=2e-47, Organism=Escherichia coli, GI1787710, Length=381, Percent_Identity=29.3963254593176, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1790797, Length=336, Percent_Identity=27.6785714285714, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI48994949, Length=225, Percent_Identity=26.2222222222222, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6321236, Length=487, Percent_Identity=22.3819301848049, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321000, Length=260, Percent_Identity=28.8461538461538, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321929, Length=351, Percent_Identity=21.3675213675214, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356535, Length=395, Percent_Identity=27.0886075949367, Blast_Score=118, Evalue=7e-27,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 44365; Mature: 44365
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATF CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC PAERMREAAERVLRDAPGAALQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLL CHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAAGLVPEALVPALTREARLLYA HHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCHHCCCHHHHHHHHHHCCEEEEE QPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHH LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIP HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AIRTLYAAQCEAMLGSLARHMPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH VPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLRERV CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATF CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC PAERMREAAERVLRDAPGAALQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLL CHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAAGLVPEALVPALTREARLLYA HHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCHHCCCHHHHHHHHHHCCEEEEE QPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHH LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIP HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH AIRTLYAAQCEAMLGSLARHMPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH VPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLRERV CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA