Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028234

Identifier: 238028234

GI number: 238028234

Start: 3059242

End: 3059700

Strand: Direct

Name: 238028234

Synonym: bglu_1g26870

Alternate gene names: NA

Gene position: 3059242-3059700 (Clockwise)

Preceding gene: 238028233

Following gene: 238028235

Centisome position: 78.31

GC content: 66.01

Gene sequence:

>459_bases
ATGGCAAACGTCTACGACAAACTGAAGGCACTCGGCATCGAACTCCCGAGCGCGGGCGCACCGGCGGCGGCCTACGTGAT
GAGCGCGCAGAGCGGCAATACCGTCTACCTGTCCGGCCACATCGCGAAGCGGGACGGCAAGGTGTGGGTCGGCAAGCTCG
GCGCCGATCTGTCCACCGACGACGGCAAGCTCGCGGCGCGCAACGTCGCGATCGACCTGCTCGCCACGCTGCACACGCAT
ACCGGCGACCTGAACAAGGTCAAGCGCATCGTCAAGCTGATGAGCCTCGTCAATTCGACGCTCGAGTTCACCGAGCAGCA
CCTCGTCACCAACGGCGCCTCCGAGCTGATCGCCGAGGTGTTCGGCGAGGCCGGCAAGCACGCGCGCTCGGCGTTCGGCG
TCGCGCAGATCCCGCTTGGCGCCTGCGTCGAGATCGAGCTGATCGCGGAAGTCGAATGA

Upstream 100 bases:

>100_bases
GCGCGCCTCGGCCAGCTGCTGCGCGAGCGCGTCTGATGCGGCGCGCCGGGCCTCGCCCCGGCGCGCACCGATTGTTCCCT
ACCACGAGGAAATACCACTG

Downstream 100 bases:

>100_bases
CGGCCCGGCGCGTTCGCTTCAAGCAGGTCGACGTCTTCACGGCGGTGCCGATGCGCGGCAATCCGCTCGCGGTGATCTTC
GACGCGGACGGCCTGGCCGA

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Endoribonuclease; Transcriptional Regulator; Translation Initiation Inhibitor YjgF Family; Transcription Regulator; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease Family Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Family; Translation Initiation Inhibitor Protein YjgF Family; 2-Aminomuconate Deaminase; YjgF-Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; YjgF Family Translation Initiation Inhibitor; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MANVYDKLKALGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKRDGKVWVGKLGADLSTDDGKLAARNVAIDLLATLHTH
TGDLNKVKRIVKLMSLVNSTLEFTEQHLVTNGASELIAEVFGEAGKHARSAFGVAQIPLGACVEIELIAEVE

Sequences:

>Translated_152_residues
MANVYDKLKALGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKRDGKVWVGKLGADLSTDDGKLAARNVAIDLLATLHTH
TGDLNKVKRIVKLMSLVNSTLEFTEQHLVTNGASELIAEVFGEAGKHARSAFGVAQIPLGACVEIELIAEVE
>Mature_151_residues
ANVYDKLKALGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKRDGKVWVGKLGADLSTDDGKLAARNVAIDLLATLHTHT
GDLNKVKRIVKLMSLVNSTLEFTEQHLVTNGASELIAEVFGEAGKHARSAFGVAQIPLGACVEIELIAEVE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15967; Mature: 15835

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVYDKLKALGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKRDGKVWVGKLGADLSTD
CCCHHHHHHHHCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCC
DGKLAARNVAIDLLATLHTHTGDLNKVKRIVKLMSLVNSTLEFTEQHLVTNGASELIAEV
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FGEAGKHARSAFGVAQIPLGACVEIELIAEVE
HHHHCHHHHHHCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
ANVYDKLKALGIELPSAGAPAAAYVMSAQSGNTVYLSGHIAKRDGKVWVGKLGADLSTD
CCHHHHHHHHCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCC
DGKLAARNVAIDLLATLHTHTGDLNKVKRIVKLMSLVNSTLEFTEQHLVTNGASELIAEV
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FGEAGKHARSAFGVAQIPLGACVEIELIAEVE
HHHHCHHHHHHCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA