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The map label for this gene is ydeK [H]

Identifier: 238028232

GI number: 238028232

Start: 3057020

End: 3057931

Strand: Direct

Name: ydeK [H]

Synonym: bglu_1g26850

Alternate gene names: 238028232

Gene position: 3057020-3057931 (Clockwise)

Preceding gene: 238028231

Following gene: 238028233

Centisome position: 78.25

GC content: 73.36

Gene sequence:

>912_bases
ATGTCCGATTCGCGCGAAACCCGCGGCATGCTGCTCGGCCTGCTCGGCGTGATGACCTTCAGCCTCACGCTGCCGATGAC
GCGCGTCGTCGTCACCGAATTCCATCCGCTGCTCAACGGGCTCGGGCGCGCACTGGCGGCCGCGGTGCCGGCCGCGCTGC
TGCTCTGGTGGCGCCGCGAGCGCTGGCCGACGCGCGCCCAGCTGAAGAGCCTGGCGGTGGTCTCGGCCGGCGTGATCGTC
GCCTATCCGGTGTTCTCGGCCTGGTCGATGAAGACGGTGCCGGCCGCGCATGGCGCGGTCGTCAACGGGCTGCAGCCGCT
GCTGGTGGCGCTCTACGCCGCCTGGCTGTCGCGCGAGCGGCCGTCGCGCGGCTTCTGGGCAAGCGCGCTCGCCGGCAGCG
CGCTGGTGATCGTCTACGCACTGCGCGACGGCGGCGGCGCCGCGCGCGCGGGCGACCTGCTGATGCTGGTGGCGGTGGGC
ATCGGCGCGCTCGGCTATGCCGAAGGCGCGCGCCTGGCCCGGCAGATCGGCGGCTGGCAGGTGATCTGCTGGGCGCTGGT
GGTATCGGCGCCGTTCCTGGTGCTGCCGGTGGGCTGGCTCGGCTGGCAGCATCACCTGACCCACCCCGGCCCGGTGCGCC
CGGCCGTCTGGCTCGCGTTCGGCTACGTCACGCTGTTCTCGCAACTGCTCGGCTTCTTCGCCTGGTACGCGGGCCTCGCG
ATGGGCGGCACCGCGCGCGTGGGCCAGGTGCAGCTGCTGCAGATCTTCTTCACGATCGCGTTCTCCGCGCTGCTGTTCGG
GGAATCGGTCGCGCCGTCGACCTGGCTGTTCGCGGCCGCCGTGATCGCCACCGTCGTGCTGGGACGCCGCGCCGGCGTGC
GCACCCTGCCGCAGCCCGCTCGCGCGGGCTGA

Upstream 100 bases:

>100_bases
TACCCCGCGCGGCCCGCGCACGCTGCGCTGAGCCGCGCCCGCCCCGCCGCCCCCGTTGCCCCCGTTGCCAATGCCCCCCA
TCTTCAGGAGCCTCACCGAC

Downstream 100 bases:

>100_bases
GCCCGCGAGCGATAATTCACACCGGTTTCGATGAGTGTTTCGCCTGACCCACCGAGGAAACGAGATGAACCCGAGCGACC
TGCCCCAACCGAACTGGCTC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSDSRETRGMLLGLLGVMTFSLTLPMTRVVVTEFHPLLNGLGRALAAAVPAALLLWWRRERWPTRAQLKSLAVVSAGVIV
AYPVFSAWSMKTVPAAHGAVVNGLQPLLVALYAAWLSRERPSRGFWASALAGSALVIVYALRDGGGAARAGDLLMLVAVG
IGALGYAEGARLARQIGGWQVICWALVVSAPFLVLPVGWLGWQHHLTHPGPVRPAVWLAFGYVTLFSQLLGFFAWYAGLA
MGGTARVGQVQLLQIFFTIAFSALLFGESVAPSTWLFAAAVIATVVLGRRAGVRTLPQPARAG

Sequences:

>Translated_303_residues
MSDSRETRGMLLGLLGVMTFSLTLPMTRVVVTEFHPLLNGLGRALAAAVPAALLLWWRRERWPTRAQLKSLAVVSAGVIV
AYPVFSAWSMKTVPAAHGAVVNGLQPLLVALYAAWLSRERPSRGFWASALAGSALVIVYALRDGGGAARAGDLLMLVAVG
IGALGYAEGARLARQIGGWQVICWALVVSAPFLVLPVGWLGWQHHLTHPGPVRPAVWLAFGYVTLFSQLLGFFAWYAGLA
MGGTARVGQVQLLQIFFTIAFSALLFGESVAPSTWLFAAAVIATVVLGRRAGVRTLPQPARAG
>Mature_302_residues
SDSRETRGMLLGLLGVMTFSLTLPMTRVVVTEFHPLLNGLGRALAAAVPAALLLWWRRERWPTRAQLKSLAVVSAGVIVA
YPVFSAWSMKTVPAAHGAVVNGLQPLLVALYAAWLSRERPSRGFWASALAGSALVIVYALRDGGGAARAGDLLMLVAVGI
GALGYAEGARLARQIGGWQVICWALVVSAPFLVLPVGWLGWQHHLTHPGPVRPAVWLAFGYVTLFSQLLGFFAWYAGLAM
GGTARVGQVQLLQIFFTIAFSALLFGESVAPSTWLFAAAVIATVVLGRRAGVRTLPQPARAG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32278; Mature: 32146

Theoretical pI: Translated: 11.90; Mature: 11.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSRETRGMLLGLLGVMTFSLTLPMTRVVVTEFHPLLNGLGRALAAAVPAALLLWWRRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RWPTRAQLKSLAVVSAGVIVAYPVFSAWSMKTVPAAHGAVVNGLQPLLVALYAAWLSRER
CCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PSRGFWASALAGSALVIVYALRDGGGAARAGDLLMLVAVGIGALGYAEGARLARQIGGWQ
CCCCCHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VICWALVVSAPFLVLPVGWLGWQHHLTHPGPVRPAVWLAFGYVTLFSQLLGFFAWYAGLA
HHHHHHHHHCCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGGTARVGQVQLLQIFFTIAFSALLFGESVAPSTWLFAAAVIATVVLGRRAGVRTLPQPA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RAG
CCC
>Mature Secondary Structure 
SDSRETRGMLLGLLGVMTFSLTLPMTRVVVTEFHPLLNGLGRALAAAVPAALLLWWRRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]