Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is lysN [H]

Identifier: 238028233

GI number: 238028233

Start: 3057966

End: 3059177

Strand: Direct

Name: lysN [H]

Synonym: bglu_1g26860

Alternate gene names: 238028233

Gene position: 3057966-3059177 (Clockwise)

Preceding gene: 238028232

Following gene: 238028234

Centisome position: 78.28

GC content: 71.62

Gene sequence:

>1212_bases
GTGTTTCGCCTGACCCACCGAGGAAACGAGATGAACCCGAGCGACCTGCCCCAACCGAACTGGCTCCTGTCCGAGCGCGC
CCGCAAGCTGACCAGCTCCGCGATCCGCGAGATCCTGAAGGTCACCGAGCGCCCGGAAGTCATTTCGTTCGCGGGCGGCC
TGCCGGCGCCGGCCACCTTCCCGGCCGAACGCATGCGCGAGGCGGCCGAGCGCGTGCTGCGCGACGCGCCGGGCGCGGCG
CTCCAATACAGCGCGACGGAGGGCTTCCTGCCGCTGCGCGAGTGGATCGCCGAGCGCTACCGCGTGCGCCTCACGCAGGT
GCTCATCACCACCGGCTCGCAGCAGGCGCTCGACCTGCTCGGCAAGGTGCTGATCGATCCGGGCAGCCGCGTGCTGGTGG
AGACGCCCACCTACCTCGGCGCGCTGCAGTCGTTCTCGCTCTACGAGCCGGCCTACGTGCAGGTGCCGAGCGACGCGGCG
GGGCTCGTACCCGAGGCGCTCGTGCCGGCGCTCACGCGCGAAGCGCGCCTGCTCTACGCGCAGCCGAATTTCCAGAACCC
GACCGGGCGCCGCATGCCGGTGGCGCGCCGCGAGGCGCTCGCCGCGTTCGCGCGCGAGAGCGCGTTCCCGGTGATCGAGG
ACGACCCCTACGGCGCGCTCAACTACCGGGGCGAGCCGCTGCCGACCCTGCTGTCGATGGCGCCCGAGCACATCGTGCAT
CTCGGCACGTTCTCGAAGGTGCTGGCGCCGGGCCTGCGGATCGGCTACGTGATCGCCCCCGAGGCGCTGCACGCCAAGCT
CGTGCAGGCCAAGCAGGCCACCGACCTGCACACGCCGTCGCTCACGCAGCGCATCGCCCACGAGGTACTCCGCGACGACT
TCCTCGACACGCACATCCCGGCCATCCGCACGCTCTATGCCGCACAATGCGAGGCGATGCTCGGCTCGCTCGCGCGCCAC
ATGCCCGAAGGCGTGAGCTGGAACCGCCCCGAGGGCGGCATGTTCATCTGGGTGCAGCTGCCCAACGGGATCGACAGCAT
GGCGCTGCTCGAGGCCGCGATCGCGCAGCACGTGGCGTTCGTGCCCGGCGCGCCGTTCTTCGCCGACGAGGCGCAGGCCA
GCACGCTGCGCCTGTCGTTCGTGACGGTGCCGCCCGAGCAGATCGAGCAGGGCGTCGCGCGCCTCGGCCAGCTGCTGCGC
GAGCGCGTCTGA

Upstream 100 bases:

>100_bases
GCCACCGTCGTGCTGGGACGCCGCGCCGGCGTGCGCACCCTGCCGCAGCCCGCTCGCGCGGGCTGAGCCCGCGAGCGATA
ATTCACACCGGTTTCGATGA

Downstream 100 bases:

>100_bases
TGCGGCGCGCCGGGCCTCGCCCCGGCGCGCACCGATTGTTCCCTACCACGAGGAAATACCACTGATGGCAAACGTCTACG
ACAAACTGAAGGCACTCGGC

Product: aminotransferase family protein

Products: NA

Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMREAAERVLRDAPGAA
LQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLLGKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAA
GLVPEALVPALTREARLLYAQPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH
LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIPAIRTLYAAQCEAMLGSLARH
MPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAFVPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLR
ERV

Sequences:

>Translated_403_residues
MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMREAAERVLRDAPGAA
LQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLLGKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAA
GLVPEALVPALTREARLLYAQPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH
LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIPAIRTLYAAQCEAMLGSLARH
MPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAFVPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLR
ERV
>Mature_403_residues
MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATFPAERMREAAERVLRDAPGAA
LQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLLGKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAA
GLVPEALVPALTREARLLYAQPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH
LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIPAIRTLYAAQCEAMLGSLARH
MPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAFVPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLR
ERV

Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=416, Percent_Identity=29.8076923076923, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI33469970, Length=416, Percent_Identity=29.8076923076923, Blast_Score=187, Evalue=2e-47,
Organism=Escherichia coli, GI1787710, Length=381, Percent_Identity=29.3963254593176, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1790797, Length=336, Percent_Identity=27.6785714285714, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI48994949, Length=225, Percent_Identity=26.2222222222222, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321236, Length=487, Percent_Identity=22.3819301848049, Blast_Score=103, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6321000, Length=260, Percent_Identity=28.8461538461538, Blast_Score=88, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321929, Length=351, Percent_Identity=21.3675213675214, Blast_Score=81, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356535, Length=395, Percent_Identity=27.0886075949367, Blast_Score=118, Evalue=7e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.39 [H]

Molecular weight: Translated: 44365; Mature: 44365

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATF
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
PAERMREAAERVLRDAPGAALQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLL
CHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAAGLVPEALVPALTREARLLYA
HHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCHHCCCHHHHHHHHHHCCEEEEE
QPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHH
LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIP
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIRTLYAAQCEAMLGSLARHMPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLRERV
CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFRLTHRGNEMNPSDLPQPNWLLSERARKLTSSAIREILKVTERPEVISFAGGLPAPATF
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
PAERMREAAERVLRDAPGAALQYSATEGFLPLREWIAERYRVRLTQVLITTGSQQALDLL
CHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GKVLIDPGSRVLVETPTYLGALQSFSLYEPAYVQVPSDAAGLVPEALVPALTREARLLYA
HHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEECCCCHHCCCHHHHHHHHHHCCEEEEE
QPNFQNPTGRRMPVARREALAAFARESAFPVIEDDPYGALNYRGEPLPTLLSMAPEHIVH
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHH
LGTFSKVLAPGLRIGYVIAPEALHAKLVQAKQATDLHTPSLTQRIAHEVLRDDFLDTHIP
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
AIRTLYAAQCEAMLGSLARHMPEGVSWNRPEGGMFIWVQLPNGIDSMALLEAAIAQHVAF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VPGAPFFADEAQASTLRLSFVTVPPEQIEQGVARLGQLLRERV
CCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA