Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028220
Identifier: 238028220
GI number: 238028220
Start: 3043710
End: 3044552
Strand: Direct
Name: 238028220
Synonym: bglu_1g26730
Alternate gene names: NA
Gene position: 3043710-3044552 (Clockwise)
Preceding gene: 238028217
Following gene: 238028221
Centisome position: 77.91
GC content: 66.19
Gene sequence:
>843_bases ATGCGCTTCGAAGGCTCCTCGCAATACGTCGCCACCGACGACCTGAAGCTCGCCGTCAACGCCGCGCTGACGCTGCAGCG GCCGCTCCTCGTCAAGGGCGAGCCCGGCACCGGCAAGACGATGCTGGCCGAGGAGGTGGCCGCCGCGCTCGGCATGCCGC TGCTGCAGTGGCACGTGAAATCCACCACCAAGGCCCAGCAGGGGCTCTACGAGTACGACGCGGTCTCGCGGCTGCGCGAT TCGCAGCTCGGCGACGAGCGCGTGAAGGACATCGCCAACTACATCGTGCGCGGGGTGCTGTGGCAGGCCTTCACGGCCGA CGAGCCGTGCGTGCTGCTGATCGACGAGATCGACAAGGCCGACATCGAATTCCCCAACGATCTGCTGCGCGAGCTCGACC GCATGGAGTTCCACGTCTACGAGACGCGCGAACTGGTACGCGCCAAGCACCGGCCGCTCGTCATCATCACCTCGAACAAC GAGAAGGAGCTGCCCGACGCGTTCCTGCGCCGCTGCTTCTTCCACTACATCCAGTTCCCCGAGCCGGCCACGATGCAGCG CATCATCGAGGTCCACTACCCCGGCATCAAGCAGGCGCTGGTGCGCGCCGCGCTCGAGAGCTTCTTCGAGCTGCGCGCCG TGTCGGGGCTCAAGAAGAAACCTTCGACCTCCGAACTGCTCGACTGGCTCAAGCTGCTGCTCGCCGAGGACATCCCGCCC GAGGCGCTGCGCTCGACCGACCACAAGTTGGTGGTGCCGCCGCTGGCCGGCGCGCTGCTGAAGAACGAGCAGGATCTGAG CCTGTTCGAGCGGCTGGTACAGATGAACCGCCACAACCGCTGA
Upstream 100 bases:
>100_bases GAGGCCCCGCCCCGACAGCGCCGCAACGATAGCAAGCGACGCGCCGACGCAACAGCGCTTCTGACTTATACTGGGATTTT TCGCCCGGAAAACCGCCGCC
Downstream 100 bases:
>100_bases GCGGCCGCCGCGCCCGAGGAGAGCCCGCCATGTCCCGCCGCGCCTTCCTGACAACCCAGTGCGCCGCCGCGCGCCGCGCC GCCTGCCCGGCGGCCGGGCC
Product: ATPase, AAA family protein
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; ATPase Central Domain-Containing Protein; MoxR-Like ATPase; AAA Family ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA ATPase; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; MoxR Family ATPase; ATPase Aaa Family; ATPase Protein; Carbon Monoxide Dehydrogenase D Protein; Chaperone ClpB; Oxidoreductase; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; ClpA/ClpB Family Protein; AAA ATPase Family Protein
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRFEGSSQYVATDDLKLAVNAALTLQRPLLVKGEPGTGKTMLAEEVAAALGMPLLQWHVKSTTKAQQGLYEYDAVSRLRD SQLGDERVKDIANYIVRGVLWQAFTADEPCVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRELVRAKHRPLVIITSNN EKELPDAFLRRCFFHYIQFPEPATMQRIIEVHYPGIKQALVRAALESFFELRAVSGLKKKPSTSELLDWLKLLLAEDIPP EALRSTDHKLVVPPLAGALLKNEQDLSLFERLVQMNRHNR
Sequences:
>Translated_280_residues MRFEGSSQYVATDDLKLAVNAALTLQRPLLVKGEPGTGKTMLAEEVAAALGMPLLQWHVKSTTKAQQGLYEYDAVSRLRD SQLGDERVKDIANYIVRGVLWQAFTADEPCVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRELVRAKHRPLVIITSNN EKELPDAFLRRCFFHYIQFPEPATMQRIIEVHYPGIKQALVRAALESFFELRAVSGLKKKPSTSELLDWLKLLLAEDIPP EALRSTDHKLVVPPLAGALLKNEQDLSLFERLVQMNRHNR >Mature_280_residues MRFEGSSQYVATDDLKLAVNAALTLQRPLLVKGEPGTGKTMLAEEVAAALGMPLLQWHVKSTTKAQQGLYEYDAVSRLRD SQLGDERVKDIANYIVRGVLWQAFTADEPCVLLIDEIDKADIEFPNDLLRELDRMEFHVYETRELVRAKHRPLVIITSNN EKELPDAFLRRCFFHYIQFPEPATMQRIIEVHYPGIKQALVRAALESFFELRAVSGLKKKPSTSELLDWLKLLLAEDIPP EALRSTDHKLVVPPLAGALLKNEQDLSLFERLVQMNRHNR
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31972; Mature: 31972
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFEGSSQYVATDDLKLAVNAALTLQRPLLVKGEPGTGKTMLAEEVAAALGMPLLQWHVK CCCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH STTKAQQGLYEYDAVSRLRDSQLGDERVKDIANYIVRGVLWQAFTADEPCVLLIDEIDKA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC DIEFPNDLLRELDRMEFHVYETRELVRAKHRPLVIITSNNEKELPDAFLRRCFFHYIQFP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC EPATMQRIIEVHYPGIKQALVRAALESFFELRAVSGLKKKPSTSELLDWLKLLLAEDIPP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH EALRSTDHKLVVPPLAGALLKNEQDLSLFERLVQMNRHNR HHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MRFEGSSQYVATDDLKLAVNAALTLQRPLLVKGEPGTGKTMLAEEVAAALGMPLLQWHVK CCCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHH STTKAQQGLYEYDAVSRLRDSQLGDERVKDIANYIVRGVLWQAFTADEPCVLLIDEIDKA HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC DIEFPNDLLRELDRMEFHVYETRELVRAKHRPLVIITSNNEKELPDAFLRRCFFHYIQFP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC EPATMQRIIEVHYPGIKQALVRAALESFFELRAVSGLKKKPSTSELLDWLKLLLAEDIPP CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH EALRSTDHKLVVPPLAGALLKNEQDLSLFERLVQMNRHNR HHHHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA