Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028221

Identifier: 238028221

GI number: 238028221

Start: 3044695

End: 3045870

Strand: Direct

Name: 238028221

Synonym: bglu_1g26740

Alternate gene names: NA

Gene position: 3044695-3045870 (Clockwise)

Preceding gene: 238028220

Following gene: 238028223

Centisome position: 77.94

GC content: 67.18

Gene sequence:

>1176_bases
ATGCTGATCGACTTCTTCTATTCGCTGCGCGCGGCGAAGCTGCCGGTCTCGGTCAAGGAATATCTGACGCTGCTCGACGC
GCTGCGCCGCGACGTCATCCCCCCGTCGATCGACGCGTTCTACTACCTCGCGCGCATGACGCTGGTGAAGGACGAGCAGT
ATTTCGACCGCTTCGATCAGGCCTTCGGCGCCTATTTCAAGGGCGTCGCAGCACTGCCCGCCGAGGCGTTCGACCTGCCG
GCCGACTGGCTCGAACAAAAGCTGCGGCGCGAGCTGACGCCCGAGGAAAAGGCCCAGATCGAGGCGATGGGCGGCCTCGA
CAAGCTGATGGCCCGGCTGCGCGAACTGCTCGACGAGCAGAAGGCGCGCCACGAGGGCGGCAACAAGTGGATCGGCACCG
GCGGCACCTCGCCGTTCGGGCACGGCGGCTTCAATCCGGAAGGCATCCGCATCGGCGGACCGTCGGCCGGCAACCGTACC
GCGCTGAAGGTATGGGAGGCGCGCGCCTACCGCGACTACGACGATTCGGTCGAGCTGGGCACGCGCAACATCAAGGTCGC
GCTGCGCCGGCTGCGCCGCTTCGCGCGCGAGGGCGCGGCCGACCAGCTCGACCTGCCCGGCACGATCCGCAGCACCGCCG
CGAACGCCGGCTGGCTCGACCTGCGGATGGTGCCCGAACGGCACAACAACGTGAAGGTGCTGATGCTGCTCGACGTGGGC
GGCTCGATGGACGATCACATCGCCCGCACCGAGGAACTGTTCTCGGCGGCAAAGGCCGAGTTCAAGCATCTCGAGTTCTA
CTACTTCCACAACTGCGTCTACGACTTCGTCTGGAAGCACAACCGCCGCCGCCACGCGGAGCGCACCCCGACCTGGGACA
TCCTTCACAAGTTCACGCCCGACTACAAGCTGATCTTCGTCGGCGACGCCACCATGAGCCCCTACGAGGTGGTGCAGCCG
GGCGGCTCGGTCGAGTACAACAACGCCGAGGCCGGCGCGGTCTGGCTGCGCCGGCTCGCCGACCAGTTCCCGCACCACGC
CTGGCTCAATCCCGAGCCCGAGCGGCTCTGGGAATACCGGCAGTCGATCGCGCTGATCCGCGACCTGCTCGGCGCGCGGA
TGTACCCGCTCACGCTCGCCGGGCTGGAAGCCGCGATGCGCCAGTTGAGCAAGTAA

Upstream 100 bases:

>100_bases
CCTTCCTGACAACCCAGTGCGCCGCCGCGCGCCGCGCCGCCTGCCCGGCGGCCGGGCCGGCCGCCACTGGCGGCGCCCGG
CCCGGCGCCCGGAGGCCGCG

Downstream 100 bases:

>100_bases
GAGGCCAGTTCAAAAACTCCCGAGAGGGGCTGTTTACTTCCTCGGCAAGCTGTTAACCTTGGGCATCAGAACAACGGAAG
TCCAAGGATGGAAGCGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLIDFFYSLRAAKLPVSVKEYLTLLDALRRDVIPPSIDAFYYLARMTLVKDEQYFDRFDQAFGAYFKGVAALPAEAFDLP
ADWLEQKLRRELTPEEKAQIEAMGGLDKLMARLRELLDEQKARHEGGNKWIGTGGTSPFGHGGFNPEGIRIGGPSAGNRT
ALKVWEARAYRDYDDSVELGTRNIKVALRRLRRFAREGAADQLDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIARTEELFSAAKAEFKHLEFYYFHNCVYDFVWKHNRRRHAERTPTWDILHKFTPDYKLIFVGDATMSPYEVVQP
GGSVEYNNAEAGAVWLRRLADQFPHHAWLNPEPERLWEYRQSIALIRDLLGARMYPLTLAGLEAAMRQLSK

Sequences:

>Translated_391_residues
MLIDFFYSLRAAKLPVSVKEYLTLLDALRRDVIPPSIDAFYYLARMTLVKDEQYFDRFDQAFGAYFKGVAALPAEAFDLP
ADWLEQKLRRELTPEEKAQIEAMGGLDKLMARLRELLDEQKARHEGGNKWIGTGGTSPFGHGGFNPEGIRIGGPSAGNRT
ALKVWEARAYRDYDDSVELGTRNIKVALRRLRRFAREGAADQLDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIARTEELFSAAKAEFKHLEFYYFHNCVYDFVWKHNRRRHAERTPTWDILHKFTPDYKLIFVGDATMSPYEVVQP
GGSVEYNNAEAGAVWLRRLADQFPHHAWLNPEPERLWEYRQSIALIRDLLGARMYPLTLAGLEAAMRQLSK
>Mature_391_residues
MLIDFFYSLRAAKLPVSVKEYLTLLDALRRDVIPPSIDAFYYLARMTLVKDEQYFDRFDQAFGAYFKGVAALPAEAFDLP
ADWLEQKLRRELTPEEKAQIEAMGGLDKLMARLRELLDEQKARHEGGNKWIGTGGTSPFGHGGFNPEGIRIGGPSAGNRT
ALKVWEARAYRDYDDSVELGTRNIKVALRRLRRFAREGAADQLDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIARTEELFSAAKAEFKHLEFYYFHNCVYDFVWKHNRRRHAERTPTWDILHKFTPDYKLIFVGDATMSPYEVVQP
GGSVEYNNAEAGAVWLRRLADQFPHHAWLNPEPERLWEYRQSIALIRDLLGARMYPLTLAGLEAAMRQLSK

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44765; Mature: 44765

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDFFYSLRAAKLPVSVKEYLTLLDALRRDVIPPSIDAFYYLARMTLVKDEQYFDRFDQ
CEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFGAYFKGVAALPAEAFDLPADWLEQKLRRELTPEEKAQIEAMGGLDKLMARLRELLDEQ
HHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
KARHEGGNKWIGTGGTSPFGHGGFNPEGIRIGGPSAGNRTALKVWEARAYRDYDDSVELG
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHC
TRNIKVALRRLRRFAREGAADQLDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECC
GSMDDHIARTEELFSAAKAEFKHLEFYYFHNCVYDFVWKHNRRRHAERTPTWDILHKFTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHCCC
DYKLIFVGDATMSPYEVVQPGGSVEYNNAEAGAVWLRRLADQFPHHAWLNPEPERLWEYR
CEEEEEEECCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QSIALIRDLLGARMYPLTLAGLEAAMRQLSK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIDFFYSLRAAKLPVSVKEYLTLLDALRRDVIPPSIDAFYYLARMTLVKDEQYFDRFDQ
CEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AFGAYFKGVAALPAEAFDLPADWLEQKLRRELTPEEKAQIEAMGGLDKLMARLRELLDEQ
HHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
KARHEGGNKWIGTGGTSPFGHGGFNPEGIRIGGPSAGNRTALKVWEARAYRDYDDSVELG
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHC
TRNIKVALRRLRRFAREGAADQLDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCEEEEEEEECC
GSMDDHIARTEELFSAAKAEFKHLEFYYFHNCVYDFVWKHNRRRHAERTPTWDILHKFTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHCCC
DYKLIFVGDATMSPYEVVQPGGSVEYNNAEAGAVWLRRLADQFPHHAWLNPEPERLWEYR
CEEEEEEECCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QSIALIRDLLGARMYPLTLAGLEAAMRQLSK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA