| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is rhlE [H]
Identifier: 238028205
GI number: 238028205
Start: 3024868
End: 3026310
Strand: Reverse
Name: rhlE [H]
Synonym: bglu_1g26570
Alternate gene names: 238028205
Gene position: 3026310-3024868 (Counterclockwise)
Preceding gene: 238028206
Following gene: 238028202
Centisome position: 77.47
GC content: 69.02
Gene sequence:
>1443_bases ATGTCCGATTCAGCAGTCACGCCCGTCGATGCAACTTTCGATCAGTTCGGCCTCGCGCCCGACATTCTGAAGGCCATTGC GGACCAGGGCTACACGAAGCCCACGCCGATCCAGGCGAAAGCGATTCCGGTCGTGCTGTCCGGGCGCGACGTGATGGGCG CCGCGCAGACGGGCACCGGCAAGACCGCCAGCTTTTCGCTGCCGATCATCCAGCGGCTGCTGCCGCAGGCCAACACGAGC GCCTCGCCCGCGCGCCACCCGGTGCGCGCGCTGATCCTCACGCCGACGCGCGAGCTGGCCGACCAGGTGGCCGCCAACGT CCATTCCTATGCGAAGCACACGGCGCTGCGCAGCGCCGTGGTGTTCGGCGGTGTCGACATGAACCCGCAGATGGCCGAGC TGCGGCGCGGCGTCGAGATCCTGATCGCCACCCCCGGCCGGCTGCTCGATCACGTCCAGCAGAAGACGGCGAACCTCGGG CAGGTGCAGATGCTGGTGCTCGACGAGGCCGACCGGATGCTCGACATGGGCTTTCTGCCCGACCTGCAGCGCATCCTGAA CCTGCTGCCGAAGGCGCGCCAGACGCTGTTGTTCTCGGCGACGTTCTCGCCCGAAATCAAGAAGCTGGCCGCCACCTACC TGACCAACCCGCAGACCATCGAGGTCGCGCGCAGCAACGCGACCGCGACCAACGTCACGCAGATCGTCTATGACATCGCC GAGGGCGACAAGCAGGCGGCCGTGGTCAAGCTGATCCGCGATCGCGCGCTCAAGCAGGTGATCGTGTTCTGCAACAGCAA GATCGGCGCGAGCCGGCTCGCGCGCCTGCTCGAGCGCGACGGCGTGGTCGCCACGGCGATTCACGGCGACCGCTCGCAGA ACGAGCGGATGCAGGCGCTCGAGGCGTTCAAGCGCGGCGAGGTGGAGGCGCTGGTGGCCACCGACGTGGCCGCGCGCGGG CTCGACATCGCCGAGCTGCCGGCCGTGATCAACTTCGACCTGCCGTTCAGCGCCGAGGACTACGTCCACCGGATCGGCCG CACCGGCCGCGCGGGCGCCTCGGGCGATGCGCTGTCGCTGTGCAGCCCGAACGAGCGCAAGCAACTCGCCGATATCGAGA AGCTGATCAAGCGCGACCTGCCGTTGCAGCCGCTCGCGATCGAGGCGCCGGTGCGCATGCGCCGCGAGCATGGCGAGCGC AGCGAGCGCGGCAGCCGCGACGAAGCGCGCGCGCCGCGCAGGGCGCATGGCGGCGAACGTGGCCATCATCATCATTCGCG TCGCGAGGCGCCGGTCGACGAGTTTTTCCTGAAGCCCTACGAGCCCTCGCCGAGCGCGCGTCAGCCGGAAGAGGCCAGCA AGCCCGCGCAGACCGAGAAGAAGTCGAAGCAGCCGCTCGCGGCCTTGCTCGGCGGTTTCGGGATGCCGCGCCGCTCCTCA TAG
Upstream 100 bases:
>100_bases CGCAGCAGGTCCGTCGTCATGTCCATCCGTTGTTCGCGCGGCCGCTGCCAGTCAGCCGGGCCGCGCTGGAATCCCCGCCG CGCCACTTGAGCGAAACGCC
Downstream 100 bases:
>100_bases GCGCGGCCGGGTCGCTGCGCCGGGCGCAGCGAGCGGCCCGAAGGCGGTGGCAGACGGGTGCAGGCGCGAGCCTGCGCCCG TTTTTGTTTGGCGGGTGACG
Product: putative ATP-dependent RNA helicase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MSDSAVTPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTS ASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLG QVQMLVLDEADRMLDMGFLPDLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIA EGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQALEAFKRGEVEALVATDVAARG LDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRDLPLQPLAIEAPVRMRREHGER SERGSRDEARAPRRAHGGERGHHHHSRREAPVDEFFLKPYEPSPSARQPEEASKPAQTEKKSKQPLAALLGGFGMPRRSS
Sequences:
>Translated_480_residues MSDSAVTPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTS ASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLG QVQMLVLDEADRMLDMGFLPDLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIA EGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQALEAFKRGEVEALVATDVAARG LDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRDLPLQPLAIEAPVRMRREHGER SERGSRDEARAPRRAHGGERGHHHHSRREAPVDEFFLKPYEPSPSARQPEEASKPAQTEKKSKQPLAALLGGFGMPRRSS >Mature_479_residues SDSAVTPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSA SPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQ VQMLVLDEADRMLDMGFLPDLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIAE GDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQALEAFKRGEVEALVATDVAARGL DIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSLCSPNERKQLADIEKLIKRDLPLQPLAIEAPVRMRREHGERS ERGSRDEARAPRRAHGGERGHHHHSRREAPVDEFFLKPYEPSPSARQPEEASKPAQTEKKSKQPLAALLGGFGMPRRSS
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4758138, Length=370, Percent_Identity=41.6216216216216, Blast_Score=289, Evalue=4e-78, Organism=Homo sapiens, GI262118318, Length=370, Percent_Identity=41.0810810810811, Blast_Score=288, Evalue=7e-78, Organism=Homo sapiens, GI216548263, Length=370, Percent_Identity=41.0810810810811, Blast_Score=288, Evalue=8e-78, Organism=Homo sapiens, GI262231852, Length=370, Percent_Identity=41.0810810810811, Blast_Score=288, Evalue=8e-78, Organism=Homo sapiens, GI13518015, Length=370, Percent_Identity=41.0810810810811, Blast_Score=288, Evalue=1e-77, Organism=Homo sapiens, GI148613856, Length=371, Percent_Identity=41.5094339622642, Blast_Score=288, Evalue=1e-77, Organism=Homo sapiens, GI38201710, Length=371, Percent_Identity=41.5094339622642, Blast_Score=288, Evalue=1e-77, Organism=Homo sapiens, GI301171467, Length=430, Percent_Identity=40.4651162790698, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI301171475, Length=400, Percent_Identity=41.5, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI87196351, Length=400, Percent_Identity=41.5, Blast_Score=283, Evalue=4e-76, Organism=Homo sapiens, GI20149629, Length=414, Percent_Identity=39.3719806763285, Blast_Score=280, Evalue=3e-75, Organism=Homo sapiens, GI169881239, Length=406, Percent_Identity=40.3940886699507, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI13514809, Length=406, Percent_Identity=40.3940886699507, Blast_Score=279, Evalue=5e-75, Organism=Homo sapiens, GI224593278, Length=399, Percent_Identity=40.6015037593985, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=41.5300546448087, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=41.5300546448087, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI222352149, Length=412, Percent_Identity=38.1067961165049, Blast_Score=275, Evalue=8e-74, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=38.5224274406332, Blast_Score=275, Evalue=9e-74, Organism=Homo sapiens, GI21071032, Length=362, Percent_Identity=40.0552486187845, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI41327773, Length=370, Percent_Identity=39.4594594594595, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI188035877, Length=370, Percent_Identity=38.3783783783784, Blast_Score=255, Evalue=5e-68, Organism=Homo sapiens, GI55749865, Length=367, Percent_Identity=37.3297002724796, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI164664518, Length=388, Percent_Identity=34.5360824742268, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI7661920, Length=383, Percent_Identity=34.2036553524804, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI164419743, Length=372, Percent_Identity=38.7096774193548, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI51094101, Length=372, Percent_Identity=38.7096774193548, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=37.8306878306878, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI41327776, Length=412, Percent_Identity=36.4077669902913, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI13514831, Length=380, Percent_Identity=36.8421052631579, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=35.8090185676393, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=35.7333333333333, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI38327634, Length=356, Percent_Identity=36.2359550561798, Blast_Score=210, Evalue=2e-54, Organism=Homo sapiens, GI9506931, Length=401, Percent_Identity=32.1695760598504, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI21040371, Length=375, Percent_Identity=31.7333333333333, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI4758112, Length=375, Percent_Identity=32, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI18375623, Length=375, Percent_Identity=32, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI38569505, Length=380, Percent_Identity=32.1052631578947, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI38569503, Length=380, Percent_Identity=32.1052631578947, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI41327779, Length=385, Percent_Identity=33.7662337662338, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI4503529, Length=378, Percent_Identity=30.952380952381, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI83700235, Length=387, Percent_Identity=30.2325581395349, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI17505907, Length=411, Percent_Identity=32.1167883211679, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=32.8767123287671, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=32.8767123287671, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI256223453, Length=369, Percent_Identity=29.810298102981, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI9966805, Length=343, Percent_Identity=35.2769679300292, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI164419732, Length=373, Percent_Identity=31.9034852546917, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=33.1360946745562, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI62241022, Length=347, Percent_Identity=33.4293948126801, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI256773275, Length=371, Percent_Identity=33.4231805929919, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=30.0733496332518, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI62241024, Length=326, Percent_Identity=33.4355828220859, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=38.6363636363636, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI284005309, Length=357, Percent_Identity=23.249299719888, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=56.7567567567568, Blast_Score=419, Evalue=1e-118, Organism=Escherichia coli, GI87082221, Length=373, Percent_Identity=41.8230563002681, Blast_Score=301, Evalue=5e-83, Organism=Escherichia coli, GI1790214, Length=384, Percent_Identity=40.625, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI1787605, Length=367, Percent_Identity=39.2370572207085, Blast_Score=246, Evalue=3e-66, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=40.2816901408451, Blast_Score=231, Evalue=8e-62, Organism=Escherichia coli, GI48994977, Length=372, Percent_Identity=25.5376344086022, Blast_Score=85, Evalue=9e-18, Organism=Caenorhabditis elegans, GI32565321, Length=392, Percent_Identity=37.7551020408163, Blast_Score=288, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17510307, Length=378, Percent_Identity=42.5925925925926, Blast_Score=284, Evalue=8e-77, Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=42.5925925925926, Blast_Score=284, Evalue=9e-77, Organism=Caenorhabditis elegans, GI71995514, Length=378, Percent_Identity=42.5925925925926, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI115533224, Length=394, Percent_Identity=38.8324873096447, Blast_Score=274, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17510559, Length=394, Percent_Identity=37.5634517766497, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI17555296, Length=404, Percent_Identity=37.1287128712871, Blast_Score=264, Evalue=8e-71, Organism=Caenorhabditis elegans, GI86570094, Length=364, Percent_Identity=40.1098901098901, Blast_Score=258, Evalue=4e-69, Organism=Caenorhabditis elegans, GI71995718, Length=404, Percent_Identity=40.0990099009901, Blast_Score=255, Evalue=4e-68, Organism=Caenorhabditis elegans, GI17552114, Length=362, Percent_Identity=36.4640883977901, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI71995724, Length=377, Percent_Identity=34.7480106100796, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17507945, Length=379, Percent_Identity=37.467018469657, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17507121, Length=377, Percent_Identity=34.4827586206897, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=38.8140161725067, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17537549, Length=399, Percent_Identity=36.3408521303258, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI71999646, Length=362, Percent_Identity=36.7403314917127, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI71999644, Length=362, Percent_Identity=36.7403314917127, Blast_Score=241, Evalue=7e-64, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=37.7358490566038, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17552642, Length=386, Percent_Identity=38.0829015544041, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=36.5789473684211, Blast_Score=234, Evalue=6e-62, Organism=Caenorhabditis elegans, GI17507881, Length=378, Percent_Identity=37.5661375661376, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71987143, Length=377, Percent_Identity=31.5649867374005, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI115532546, Length=404, Percent_Identity=32.1782178217822, Blast_Score=207, Evalue=7e-54, Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=33.8624338624339, Blast_Score=207, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=37.1428571428571, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17508543, Length=400, Percent_Identity=32.25, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=31.1475409836066, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI193208216, Length=402, Percent_Identity=33.5820895522388, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17556951, Length=369, Percent_Identity=33.8753387533875, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI193206561, Length=356, Percent_Identity=32.5842696629214, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71990816, Length=376, Percent_Identity=31.6489361702128, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17507641, Length=422, Percent_Identity=31.5165876777251, Blast_Score=181, Evalue=7e-46, Organism=Caenorhabditis elegans, GI25148203, Length=426, Percent_Identity=26.7605633802817, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17536099, Length=388, Percent_Identity=30.9278350515464, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17536101, Length=388, Percent_Identity=30.9278350515464, Blast_Score=171, Evalue=9e-43, Organism=Caenorhabditis elegans, GI17536103, Length=402, Percent_Identity=30.8457711442786, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI32564046, Length=401, Percent_Identity=31.4214463840399, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=29.5180722891566, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=26.536312849162, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71997889, Length=380, Percent_Identity=27.3684210526316, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI71982862, Length=211, Percent_Identity=31.7535545023697, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI25148205, Length=341, Percent_Identity=24.633431085044, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=38.8349514563107, Blast_Score=89, Evalue=7e-18, Organism=Caenorhabditis elegans, GI25145561, Length=384, Percent_Identity=23.6979166666667, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71987997, Length=370, Percent_Identity=24.0540540540541, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71987993, Length=370, Percent_Identity=24.0540540540541, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321856, Length=372, Percent_Identity=42.4731182795699, Blast_Score=298, Evalue=1e-81, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=43.1372549019608, Blast_Score=292, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6325138, Length=374, Percent_Identity=41.7112299465241, Blast_Score=279, Evalue=9e-76, Organism=Saccharomyces cerevisiae, GI6324778, Length=350, Percent_Identity=42, Blast_Score=273, Evalue=6e-74, Organism=Saccharomyces cerevisiae, GI6321360, Length=372, Percent_Identity=40.3225806451613, Blast_Score=272, Evalue=7e-74, Organism=Saccharomyces cerevisiae, GI6320041, Length=387, Percent_Identity=35.9173126614987, Blast_Score=261, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6323021, Length=366, Percent_Identity=39.6174863387978, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6320224, Length=371, Percent_Identity=33.1536388140162, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6320173, Length=430, Percent_Identity=32.7906976744186, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=35.2459016393443, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=418, Percent_Identity=33.2535885167464, Blast_Score=218, Evalue=1e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=36.6666666666667, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6319714, Length=383, Percent_Identity=33.6814621409922, Blast_Score=210, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6324620, Length=361, Percent_Identity=34.9030470914127, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=370, Percent_Identity=34.3243243243243, Blast_Score=206, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6322912, Length=364, Percent_Identity=33.5164835164835, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6322323, Length=364, Percent_Identity=33.5164835164835, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=384, Percent_Identity=33.3333333333333, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=392, Percent_Identity=32.1428571428571, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=30.6763285024155, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=409, Percent_Identity=31.0513447432763, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=28.0871670702179, Blast_Score=171, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=401, Percent_Identity=31.4214463840399, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6322876, Length=438, Percent_Identity=28.5388127853881, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=444, Percent_Identity=27.027027027027, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321374, Length=469, Percent_Identity=23.2409381663113, Blast_Score=101, Evalue=3e-22, Organism=Drosophila melanogaster, GI17985987, Length=397, Percent_Identity=42.3173803526448, Blast_Score=298, Evalue=6e-81, Organism=Drosophila melanogaster, GI24584994, Length=392, Percent_Identity=38.5204081632653, Blast_Score=288, Evalue=5e-78, Organism=Drosophila melanogaster, GI21356161, Length=369, Percent_Identity=42.8184281842818, Blast_Score=282, Evalue=4e-76, Organism=Drosophila melanogaster, GI21355075, Length=377, Percent_Identity=39.2572944297082, Blast_Score=281, Evalue=5e-76, Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=40.3794037940379, Blast_Score=281, Evalue=7e-76, Organism=Drosophila melanogaster, GI18857967, Length=377, Percent_Identity=39.7877984084881, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=41.2742382271468, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24585582, Length=429, Percent_Identity=37.5291375291375, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=41.1602209944751, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=41.1602209944751, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=41.1602209944751, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=41.1602209944751, Blast_Score=271, Evalue=6e-73, Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=41.1602209944751, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=41.1602209944751, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=41.1602209944751, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI17977678, Length=383, Percent_Identity=39.686684073107, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24642151, Length=368, Percent_Identity=38.5869565217391, Blast_Score=262, Evalue=3e-70, Organism=Drosophila melanogaster, GI24662330, Length=416, Percent_Identity=36.7788461538462, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=36.1878453038674, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=36.1878453038674, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24645031, Length=386, Percent_Identity=33.160621761658, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI281365720, Length=323, Percent_Identity=40.2476780185758, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=36.745406824147, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24582080, Length=386, Percent_Identity=33.160621761658, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24582078, Length=386, Percent_Identity=33.160621761658, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI17136248, Length=386, Percent_Identity=33.160621761658, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24582075, Length=386, Percent_Identity=33.160621761658, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=36.8271954674221, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=36.8271954674221, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=33.1521739130435, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=33.7837837837838, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=31.9672131147541, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=31.9672131147541, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=31.9672131147541, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI20130173, Length=462, Percent_Identity=30.0865800865801, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI24642822, Length=388, Percent_Identity=32.7319587628866, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI21355559, Length=420, Percent_Identity=32.8571428571429, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24643725, Length=404, Percent_Identity=30.6930693069307, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=29.287598944591, Blast_Score=168, Evalue=7e-42, Organism=Drosophila melanogaster, GI19920478, Length=386, Percent_Identity=31.3471502590674, Blast_Score=168, Evalue=1e-41, Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=32.1321321321321, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=28.448275862069, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI17136666, Length=472, Percent_Identity=26.271186440678, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI18859659, Length=245, Percent_Identity=34.2857142857143, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI28571338, Length=245, Percent_Identity=34.2857142857143, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24646066, Length=356, Percent_Identity=22.752808988764, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 52283; Mature: 52152
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSAVTPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTG CCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAV CCCEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQMLVLDEADRMLDMGFLP HCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCH DLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIA HHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH EGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQAL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH EAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSL HHHHCCCCEEHHHHHHHHCCCCHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEC CSPNERKQLADIEKLIKRDLPLQPLAIEAPVRMRREHGERSERGSRDEARAPRRAHGGER CCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCHHHCCCCHHHCCCHHHCCCCC GHHHHSRREAPVDEFFLKPYEPSPSARQPEEASKPAQTEKKSKQPLAALLGGFGMPRRSS CCCCCHHCCCCHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHCCHHHHHHCCCCCCCCCC >Mature Secondary Structure SDSAVTPVDATFDQFGLAPDILKAIADQGYTKPTPIQAKAIPVVLSGRDVMGAAQTGTG CCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHSYAKHTALRSAV CCCEECHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQMLVLDEADRMLDMGFLP HCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHCCCCH DLQRILNLLPKARQTLLFSATFSPEIKKLAATYLTNPQTIEVARSNATATNVTQIVYDIA HHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH EGDKQAAVVKLIRDRALKQVIVFCNSKIGASRLARLLERDGVVATAIHGDRSQNERMQAL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH EAFKRGEVEALVATDVAARGLDIAELPAVINFDLPFSAEDYVHRIGRTGRAGASGDALSL HHHHCCCCEEHHHHHHHHCCCCHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEC CSPNERKQLADIEKLIKRDLPLQPLAIEAPVRMRREHGERSERGSRDEARAPRRAHGGER CCCCHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCHHHCCCCHHHCCCHHHCCCCC GHHHHSRREAPVDEFFLKPYEPSPSARQPEEASKPAQTEKKSKQPLAALLGGFGMPRRSS CCCCCHHCCCCHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]