| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mliC [H]
Identifier: 238028206
GI number: 238028206
Start: 3026529
End: 3026915
Strand: Reverse
Name: mliC [H]
Synonym: bglu_1g26580
Alternate gene names: 238028206
Gene position: 3026915-3026529 (Counterclockwise)
Preceding gene: 238028207
Following gene: 238028205
Centisome position: 77.48
GC content: 71.58
Gene sequence:
>387_bases ATGCACCAACGCATCATCTGCACGCTCTGCCTGCTGGCCGGCCTGGCCGGCGCACGGGCGGCGCTGGCCGCGCAGCTGAC GGTGGAGGAAATCGATACCGACGCACGCACCGTCGCCACCTATCGCTGCGCGAACCAGCCGAAGCCGGTGCGCGTGGCTT ACTGGCTGGCCCGCAACGGCCAGAGTTTCGCGCTGGTGCCGGTCGACGGCCGGCCGATGCTGTTCGTCGATACCGTGTCG GCCTCGGGCGCGCGCTACCAGGCCGGCCGCTACACCTGGTGGACCAAGGGGCCGACCGGCAACCTGACCGACGAGATCGC GGGGCCGTCCGCGCCGCCGCTGCTCGCCGACTGCGAGGAAATCAAGGCGAAGCGCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases TCCCTGAGCGTTTCGCTCGCGTCCCGCACCGTTTCGCCTGCCGGGCCCGGATCGCCTGCCGGTTGCGGACTGCCCGGCAC CCATTGAGGAAGGATTCGCC
Downstream 100 bases:
>100_bases CGGTCCCACCGGGCTCGTTACGCGCCAGTGCTACAATATTGCCCTTTCCGTCGGCGTCCGGCCGAACGGGGCGGCGCGCC AGCCGAATCCGGTGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNGQSFALVPVDGRPMLFVDTVS ASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEEIKAKRAPR
Sequences:
>Translated_128_residues MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNGQSFALVPVDGRPMLFVDTVS ASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEEIKAKRAPR >Mature_128_residues MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNGQSFALVPVDGRPMLFVDTVS ASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEEIKAKRAPR
Specific function: Specifically inhibits C-type lysozymes [H]
COG id: COG3895
COG function: function code R; Predicted periplasmic protein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mliC family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018660 [H]
Pfam domain/function: PF09864 DUF2091 [H]
EC number: NA
Molecular weight: Translated: 13842; Mature: 13842
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNG CCCHHHHHHHHHHCCCCCHHHHHHEEEHHHCCCCCHHEEEEECCCCCCCEEEEEEEECCC QSFALVPVDGRPMLFVDTVSASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEE CEEEEEEECCCCEEEEEECCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH IKAKRAPR HHHCCCCC >Mature Secondary Structure MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNG CCCHHHHHHHHHHCCCCCHHHHHHEEEHHHCCCCCHHEEEEECCCCCCCEEEEEEEECCC QSFALVPVDGRPMLFVDTVSASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEE CEEEEEEECCCCEEEEEECCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH IKAKRAPR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA