Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is mliC [H]

Identifier: 238028206

GI number: 238028206

Start: 3026529

End: 3026915

Strand: Reverse

Name: mliC [H]

Synonym: bglu_1g26580

Alternate gene names: 238028206

Gene position: 3026915-3026529 (Counterclockwise)

Preceding gene: 238028207

Following gene: 238028205

Centisome position: 77.48

GC content: 71.58

Gene sequence:

>387_bases
ATGCACCAACGCATCATCTGCACGCTCTGCCTGCTGGCCGGCCTGGCCGGCGCACGGGCGGCGCTGGCCGCGCAGCTGAC
GGTGGAGGAAATCGATACCGACGCACGCACCGTCGCCACCTATCGCTGCGCGAACCAGCCGAAGCCGGTGCGCGTGGCTT
ACTGGCTGGCCCGCAACGGCCAGAGTTTCGCGCTGGTGCCGGTCGACGGCCGGCCGATGCTGTTCGTCGATACCGTGTCG
GCCTCGGGCGCGCGCTACCAGGCCGGCCGCTACACCTGGTGGACCAAGGGGCCGACCGGCAACCTGACCGACGAGATCGC
GGGGCCGTCCGCGCCGCCGCTGCTCGCCGACTGCGAGGAAATCAAGGCGAAGCGCGCGCCGCGCTGA

Upstream 100 bases:

>100_bases
TCCCTGAGCGTTTCGCTCGCGTCCCGCACCGTTTCGCCTGCCGGGCCCGGATCGCCTGCCGGTTGCGGACTGCCCGGCAC
CCATTGAGGAAGGATTCGCC

Downstream 100 bases:

>100_bases
CGGTCCCACCGGGCTCGTTACGCGCCAGTGCTACAATATTGCCCTTTCCGTCGGCGTCCGGCCGAACGGGGCGGCGCGCC
AGCCGAATCCGGTGGCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNGQSFALVPVDGRPMLFVDTVS
ASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEEIKAKRAPR

Sequences:

>Translated_128_residues
MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNGQSFALVPVDGRPMLFVDTVS
ASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEEIKAKRAPR
>Mature_128_residues
MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNGQSFALVPVDGRPMLFVDTVS
ASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEEIKAKRAPR

Specific function: Specifically inhibits C-type lysozymes [H]

COG id: COG3895

COG function: function code R; Predicted periplasmic protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Note=Anchored to the periplasmic side (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mliC family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018660 [H]

Pfam domain/function: PF09864 DUF2091 [H]

EC number: NA

Molecular weight: Translated: 13842; Mature: 13842

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNG
CCCHHHHHHHHHHCCCCCHHHHHHEEEHHHCCCCCHHEEEEECCCCCCCEEEEEEEECCC
QSFALVPVDGRPMLFVDTVSASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEE
CEEEEEEECCCCEEEEEECCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
IKAKRAPR
HHHCCCCC
>Mature Secondary Structure
MHQRIICTLCLLAGLAGARAALAAQLTVEEIDTDARTVATYRCANQPKPVRVAYWLARNG
CCCHHHHHHHHHHCCCCCHHHHHHEEEHHHCCCCCHHEEEEECCCCCCCEEEEEEEECCC
QSFALVPVDGRPMLFVDTVSASGARYQAGRYTWWTKGPTGNLTDEIAGPSAPPLLADCEE
CEEEEEEECCCCEEEEEECCCCCCEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHH
IKAKRAPR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA