Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238028199
Identifier: 238028199
GI number: 238028199
Start: 3015423
End: 3016265
Strand: Direct
Name: 238028199
Synonym: bglu_1g26510
Alternate gene names: NA
Gene position: 3015423-3016265 (Clockwise)
Preceding gene: 238028198
Following gene: 238028200
Centisome position: 77.19
GC content: 68.68
Gene sequence:
>843_bases ATGTTCTCCATCATCATCCCGACCTGGAACAACCTGCCGTATCTGCAATGCGTGGTCGCGAGCCTGCGCCGCCATTCCGC TTACGAGCATCAGATCATCGTCCACGTCAACGACGGCTCGGACGGCACGCTCGACTGGGTCAGGCAGGCGGGCATCGAGC ACACCGCGTCGCCCGCCAACATCGGCATCTGTCACGCGGTCAACCTCGCGGCGGCGCGCGCCACGCGCGACTACGTGGTC TACATGAACGACGACATGGCGGTCTGCCCCGGCTGGGACACCGCGCTCGTCGAACGCGCCGCGGCCATGCCGACCGATCT GTTCATGCTGTCGGGCACGATGGTCGAACCGGTCGATACCGGCAACCCCTGCGTGGTGGTGCGCGACTTCGGCCGCGACG CGGCGGCGCTCGATCTCGACGCGCTCGCGGCCGCCACCCCGGGCCTGCGGCGCGCCGACTGGCTCGGCGCCACCTGGCCG CCGACGCTGGTGCGCCGCGACTGGTGGCACCGCGTGGGCGGCTACAGCAGCGAGCTGAGCCCGGGCATGAGCAGCGACAA CGATCTGTCGATGAAGATGTGGGACGCCGGCTGCCGGATCTTCATCGGCGTCGGCGACAGCCTCGTCTATCACTTCCAGC AGAAAAGCACGGGCAAGGTGGTCAAGAACGACGGCCGCCGCCAGTTCCTCAACAAGTGGGGCATGACGCAGGCGACCTTC GACCGCTTCTACCTGCGCCGCGGCCAGCCGCTCGGCACCACGCTCGCGCTCGACGAGCCGGCCGTCGAAGGGCGTCTCAA GCGCGCGCTGCTGCGTTCGCGGATCAAGCGCGCGCTCTCCTGA
Upstream 100 bases:
>100_bases GCGAGGCAAGCGGCCCGGGTACAATGCGGGCCACCGTCACGCGCATCGGGCCGCGCCGTTCACCCGGGTCTCCCGTCCTC CGTTTCCGAAGCCGATCACC
Downstream 100 bases:
>100_bases GGCGTCGGTCCGAGCACCGCCCGCTGCCCGCACGGCGGGGGTTGCGCGGCGGCAACACAGCACCGCGCTACGCCCGTGTC GCTCGCCGATTTGGCTCGCC
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Family 2 Protein; Group 2 Family Glycosyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MFSIIIPTWNNLPYLQCVVASLRRHSAYEHQIIVHVNDGSDGTLDWVRQAGIEHTASPANIGICHAVNLAAARATRDYVV YMNDDMAVCPGWDTALVERAAAMPTDLFMLSGTMVEPVDTGNPCVVVRDFGRDAAALDLDALAAATPGLRRADWLGATWP PTLVRRDWWHRVGGYSSELSPGMSSDNDLSMKMWDAGCRIFIGVGDSLVYHFQQKSTGKVVKNDGRRQFLNKWGMTQATF DRFYLRRGQPLGTTLALDEPAVEGRLKRALLRSRIKRALS
Sequences:
>Translated_280_residues MFSIIIPTWNNLPYLQCVVASLRRHSAYEHQIIVHVNDGSDGTLDWVRQAGIEHTASPANIGICHAVNLAAARATRDYVV YMNDDMAVCPGWDTALVERAAAMPTDLFMLSGTMVEPVDTGNPCVVVRDFGRDAAALDLDALAAATPGLRRADWLGATWP PTLVRRDWWHRVGGYSSELSPGMSSDNDLSMKMWDAGCRIFIGVGDSLVYHFQQKSTGKVVKNDGRRQFLNKWGMTQATF DRFYLRRGQPLGTTLALDEPAVEGRLKRALLRSRIKRALS >Mature_280_residues MFSIIIPTWNNLPYLQCVVASLRRHSAYEHQIIVHVNDGSDGTLDWVRQAGIEHTASPANIGICHAVNLAAARATRDYVV YMNDDMAVCPGWDTALVERAAAMPTDLFMLSGTMVEPVDTGNPCVVVRDFGRDAAALDLDALAAATPGLRRADWLGATWP PTLVRRDWWHRVGGYSSELSPGMSSDNDLSMKMWDAGCRIFIGVGDSLVYHFQQKSTGKVVKNDGRRQFLNKWGMTQATF DRFYLRRGQPLGTTLALDEPAVEGRLKRALLRSRIKRALS
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31078; Mature: 31078
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIIIPTWNNLPYLQCVVASLRRHSAYEHQIIVHVNDGSDGTLDWVRQAGIEHTASPAN CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCC IGICHAVNLAAARATRDYVVYMNDDMAVCPGWDTALVERAAAMPTDLFMLSGTMVEPVDT CEEEHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHHCCCCCEEEECCCEECCCCC GNPCVVVRDFGRDAAALDLDALAAATPGLRRADWLGATWPPTLVRRDWWHRVGGYSSELS CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PGMSSDNDLSMKMWDAGCRIFIGVGDSLVYHFQQKSTGKVVKNDGRRQFLNKWGMTQATF CCCCCCCCCEEEEECCCCEEEEECCCHHEEEECCCCCCCHHHCCCHHHHHHHHCCCHHHH DRFYLRRGQPLGTTLALDEPAVEGRLKRALLRSRIKRALS HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSIIIPTWNNLPYLQCVVASLRRHSAYEHQIIVHVNDGSDGTLDWVRQAGIEHTASPAN CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCC IGICHAVNLAAARATRDYVVYMNDDMAVCPGWDTALVERAAAMPTDLFMLSGTMVEPVDT CEEEHHHHHHHHHCCCCEEEEECCCEEECCCCCHHHHHHHHCCCCCEEEECCCEECCCCC GNPCVVVRDFGRDAAALDLDALAAATPGLRRADWLGATWPPTLVRRDWWHRVGGYSSELS CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC PGMSSDNDLSMKMWDAGCRIFIGVGDSLVYHFQQKSTGKVVKNDGRRQFLNKWGMTQATF CCCCCCCCCEEEEECCCCEEEEECCCHHEEEECCCCCCCHHHCCCHHHHHHHHCCCHHHH DRFYLRRGQPLGTTLALDEPAVEGRLKRALLRSRIKRALS HHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA