Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is kdtX [H]
Identifier: 238028198
GI number: 238028198
Start: 3014537
End: 3015301
Strand: Direct
Name: kdtX [H]
Synonym: bglu_1g26500
Alternate gene names: 238028198
Gene position: 3014537-3015301 (Clockwise)
Preceding gene: 238028195
Following gene: 238028199
Centisome position: 77.17
GC content: 70.46
Gene sequence:
>765_bases ATGGCCGAACCCACCCTAGGCGTGGCGCTGATCGCGCTGAACGCCGCCGCCCGCCTGCCCGACTGTCTCGCCGCACTCGG TTTCGCCGACGAAGTCGTCGTGGTGGACGGCGGCAGCACCGATGCGACCGTCGAGATCGCGCGTGCGCACGGTGCGCGCG TCCTGATCGAGCGCGAATGGCCCGGTTTCGGCCCGCAAAAGAATCGCGCGATCGCGCAGCTGTCCACCGACTGGATCCTC TCGCTCGACACCGACGAAGTCGTCACGCCGGAGCTGGCCGCGTCGATCCGCGCCGCGATCCGCGCGCCCGCCGCCGACAT CTACGCGCTCGACCGGCTGTCGAGCTTCTGCGGCACCTGGATTCGCCACAGCGGCTGGTATCCGGACTGGATCGCGCGCC TGTTCCGGCGCGGCACCGCGCGCTTCTCCGACGATCTGGTGCACGAGCGGCTGATCTACGACGGCCCGACCGCACGGCTG ACGGGCAAGCTGCTGCACTACTCCTACGAGGATTTCGAAACGGTGCTGCGCAAGCTCGACAGCTACTCGAGCGCGGGCGC GCGGCAGCGCCACGCGGCCGGCCAGCGCGGCGGCTTCGGCAAGGCGCTCGGGCGCGGCCTGTGGGCCTTCGTGCGCACCT ATCTGCTGCGGCGCGGCTTCCTCGACGGCCGCGCCGGCTTCATGATCGCGGTGTTCAACGCGGAAACCGTCTATTACCGG TTTCTCAAGCTCGGGGCGCAGGCACGCCGCGGGCCGCACGCCTGA
Upstream 100 bases:
>100_bases GCCCTCCGTGCCACCTCAGGCCGGCCGGCCGCGCACCGCCGCCGCGCAAGCGGACGGGTATACTCTCGCGCACCTCCTGC CCCGCTCATCGTTTCCTCGC
Downstream 100 bases:
>100_bases CGCGCCGCGCCGCCCGTGAAAGCGAGGCAAGCGGCCCGGGTACAATGCGGGCCACCGTCACGCGCATCGGGCCGCGCCGT TCACCCGGGTCTCCCGTCCT
Product: family 2 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREWPGFGPQKNRAIAQLSTDWIL SLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTWIRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARL TGKLLHYSYEDFETVLRKLDSYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR FLKLGAQARRGPHA
Sequences:
>Translated_254_residues MAEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREWPGFGPQKNRAIAQLSTDWIL SLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTWIRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARL TGKLLHYSYEDFETVLRKLDSYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR FLKLGAQARRGPHA >Mature_253_residues AEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREWPGFGPQKNRAIAQLSTDWILS LDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTWIRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARLT GKLLHYSYEDFETVLRKLDSYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYRF LKLGAQARRGPHA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 27982; Mature: 27851
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREW CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECC PGFGPQKNRAIAQLSTDWILSLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTW CCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARLTGKLLHYSYEDFETVLRKLD HHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH SYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR HHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH FLKLGAQARRGPHA HHHHHHHHCCCCCC >Mature Secondary Structure AEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREW CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECC PGFGPQKNRAIAQLSTDWILSLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTW CCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARLTGKLLHYSYEDFETVLRKLD HHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH SYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR HHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH FLKLGAQARRGPHA HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8824620 [H]