Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is kdtX [H]

Identifier: 238028198

GI number: 238028198

Start: 3014537

End: 3015301

Strand: Direct

Name: kdtX [H]

Synonym: bglu_1g26500

Alternate gene names: 238028198

Gene position: 3014537-3015301 (Clockwise)

Preceding gene: 238028195

Following gene: 238028199

Centisome position: 77.17

GC content: 70.46

Gene sequence:

>765_bases
ATGGCCGAACCCACCCTAGGCGTGGCGCTGATCGCGCTGAACGCCGCCGCCCGCCTGCCCGACTGTCTCGCCGCACTCGG
TTTCGCCGACGAAGTCGTCGTGGTGGACGGCGGCAGCACCGATGCGACCGTCGAGATCGCGCGTGCGCACGGTGCGCGCG
TCCTGATCGAGCGCGAATGGCCCGGTTTCGGCCCGCAAAAGAATCGCGCGATCGCGCAGCTGTCCACCGACTGGATCCTC
TCGCTCGACACCGACGAAGTCGTCACGCCGGAGCTGGCCGCGTCGATCCGCGCCGCGATCCGCGCGCCCGCCGCCGACAT
CTACGCGCTCGACCGGCTGTCGAGCTTCTGCGGCACCTGGATTCGCCACAGCGGCTGGTATCCGGACTGGATCGCGCGCC
TGTTCCGGCGCGGCACCGCGCGCTTCTCCGACGATCTGGTGCACGAGCGGCTGATCTACGACGGCCCGACCGCACGGCTG
ACGGGCAAGCTGCTGCACTACTCCTACGAGGATTTCGAAACGGTGCTGCGCAAGCTCGACAGCTACTCGAGCGCGGGCGC
GCGGCAGCGCCACGCGGCCGGCCAGCGCGGCGGCTTCGGCAAGGCGCTCGGGCGCGGCCTGTGGGCCTTCGTGCGCACCT
ATCTGCTGCGGCGCGGCTTCCTCGACGGCCGCGCCGGCTTCATGATCGCGGTGTTCAACGCGGAAACCGTCTATTACCGG
TTTCTCAAGCTCGGGGCGCAGGCACGCCGCGGGCCGCACGCCTGA

Upstream 100 bases:

>100_bases
GCCCTCCGTGCCACCTCAGGCCGGCCGGCCGCGCACCGCCGCCGCGCAAGCGGACGGGTATACTCTCGCGCACCTCCTGC
CCCGCTCATCGTTTCCTCGC

Downstream 100 bases:

>100_bases
CGCGCCGCGCCGCCCGTGAAAGCGAGGCAAGCGGCCCGGGTACAATGCGGGCCACCGTCACGCGCATCGGGCCGCGCCGT
TCACCCGGGTCTCCCGTCCT

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREWPGFGPQKNRAIAQLSTDWIL
SLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTWIRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARL
TGKLLHYSYEDFETVLRKLDSYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR
FLKLGAQARRGPHA

Sequences:

>Translated_254_residues
MAEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREWPGFGPQKNRAIAQLSTDWIL
SLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTWIRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARL
TGKLLHYSYEDFETVLRKLDSYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR
FLKLGAQARRGPHA
>Mature_253_residues
AEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREWPGFGPQKNRAIAQLSTDWILS
LDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTWIRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARLT
GKLLHYSYEDFETVLRKLDSYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYRF
LKLGAQARRGPHA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27982; Mature: 27851

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREW
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECC
PGFGPQKNRAIAQLSTDWILSLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTW
CCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARLTGKLLHYSYEDFETVLRKLD
HHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH
SYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR
HHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH
FLKLGAQARRGPHA
HHHHHHHHCCCCCC
>Mature Secondary Structure 
AEPTLGVALIALNAAARLPDCLAALGFADEVVVVDGGSTDATVEIARAHGARVLIEREW
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECC
PGFGPQKNRAIAQLSTDWILSLDTDEVVTPELAASIRAAIRAPAADIYALDRLSSFCGTW
CCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
IRHSGWYPDWIARLFRRGTARFSDDLVHERLIYDGPTARLTGKLLHYSYEDFETVLRKLD
HHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH
SYSSAGARQRHAAGQRGGFGKALGRGLWAFVRTYLLRRGFLDGRAGFMIAVFNAETVYYR
HHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHH
FLKLGAQARRGPHA
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8824620 [H]