| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yfbI [C]
Identifier: 238028167
GI number: 238028167
Start: 2981425
End: 2983290
Strand: Direct
Name: yfbI [C]
Synonym: bglu_1g26190
Alternate gene names: 238028167
Gene position: 2981425-2983290 (Clockwise)
Preceding gene: 238028166
Following gene: 238028179
Centisome position: 76.32
GC content: 71.7
Gene sequence:
>1866_bases ATGCAGGGACCCGCAACTCCCGGCGGTGCGCGCTCGTCCGCACCCGCCCCCTTTCGTCATACCAAAGGCTCGGAGCGCCC ACCCGCCGGCAAGACAAGCGCCACCACCCAGGCCGCAATGCCGCTCGCCGACCACGCCTGGCCGCGCGTGCAGGCAGCCG CATTCGCGCTGACCGGGCTGCGCGTCTGGCTGCTGGTCGCCACGGTGGCCTGCGCGTATCTGCTGCCCGGCATCCTCGGC CACGACCCTTGGAAGCAGGACGAGACCTACACGTTCGGCATCATCCAGCACATGCTCGACACCGGCGACCTGATCGTGCC GACCAACGCCGGCCAGCCGTTCCTCGAGAAGCCGCCGCTCTACGATTGGACCGCGGCGGCGCTGGCCAAGCTGTTCGGCC GCTACCTGCCGCTGCACGACGCGGCGCGGCTGGCGAGCGCGCTGTTCGCTGCGCTCGCGTTCGGCTTCATGGCCCGCGCC GCGCGCATTGCGAGCGGCGCGCGGCGCTGGTTTGATCTCGACGTGATCGGCCCGGTTGCGCTCTGCGCGGGCACGCTGGT GGTGGTCAAGCACGTCCACGACATGATGACCGACGTGGCGCTGATGGCCGGTACCGCGATCGCGTTCTCGTCGCTGCTCG AACTCGTGACGGCCCGCTGCGGCGGGCGCCCCGCGGGCCGCTTCGCGGCGGCCGGCTTCGGCGCGGGGGTCGGCATCGCG CTGATGACCAAGGGCCTGTTCGTGCCACTGGTGTTCGGCGCGACGCTCGCGGCACTGCTCGTGCTGTATCCGGCCTGCCG CAGCCGTGCGTTCTTCCGCTCGCTAGGCGTGGCCGCGCTGGTGTTCGCGCCGTTCGCGCTGATCTGGCCGATCGCGCTGC TGCTGCGCTCCGAGACGCTGTTCATGACTTGGTTCTGGGACAACAACGTCGGCCGCTTCTTCGGCTTTTCGGTGCCGCGT CTCGGCGCCGAGAACGATAAGCCGCTGTTCATCTGGCGCGCGCTGCTCACGGTCGGCTTCCCGGTCGGCCCGCTCGCGGC CTGGGCGCTCGCCGCAGGCCGCTGGCGTGCCTGGCGCGTGCCGGCCGTCGGGCTGCCCGCGCTGTTCGCGGGCATCGGCA TGATCGTGCTGCAGATGGCCGCCACCTCGCGCCAGCTCTACATCCTGCCGTTCATCGCGCCGCTCGCGCTGTTGGCGGCG GACGCCGTGGCCCGCCTGCCGACGCGGGTCGCGCGCGGCTGGGACTACCTGAGCCGCGTGCTGTTCGGCGCGGCGGCCGG CCTCGCCTGGTACATCTGGTCGATCGTCACCTCGTACCACGCGTCGCGCGAGCCGATTCGCTGGCTCGGCCGCTGGCTGC CGCTCGACTGGACCGCGCCGCTCGAGTTGCCGTTCACGCTCGCCGCGGTGGCACTGACGATCGGCTGGCTGTGGCTGCTG CCGTCGCTGCGCACGACCGGCAAATGGCGCGGCGCGCTATCGTGGGCGACCGGCGTGCTGCTGGTGTGGGGGCTGATCTT CACGCTGCTGCTGCCGTGGCTCGACGCCGCCAAGAGCTATCGCTCGGTGTTCGCGAGCCTCGACCGGCAGCTCAAGCCGC AGTGGAGCGAAGGCGATTGCATGGCGAGCCTCGGGCTCGGCGAGTCGGAAGCGCCGATGCTCTATTACTTCACCGGCATC CAGCACCGGCCGGTCGCCAACCCCGCCGACACGGCCTGCACCTGGCTGATCGTGCAGGGGCTGCGCGCGGTCACGCCGGA GCCCGGCGCCGAGTGGCAGCCGTTCTGGTCGGGCGCGCGGCCCGGCGACGACAAGGAGCTGCTGCGCGTCTACGTGCGCA CCCCGCAAGGCGGCGCCAAGCCTTGA
Upstream 100 bases:
>100_bases AGGGCCATCGTGGTATCCGCCGCGTTTCGCCTCCCCACGGCAATCCTCACCAACCGGCCGAAGTCGCTGGCTGGGCAACC GATTTCTGAGACGTTCTTCG
Downstream 100 bases:
>100_bases GCCAAGCGGCGCGAGCGCCGCGCCGCCGCACGCCTCAACCCGGTCGATTGCGCATCCAGTCGGCCGTATCGTAGAACGAA TGCATGAGCCGCTCGCGCAG
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; 4-Amino-4-Deoxy-L-Arabinose Transferase; Inner Membrane Protein
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MQGPATPGGARSSAPAPFRHTKGSERPPAGKTSATTQAAMPLADHAWPRVQAAAFALTGLRVWLLVATVACAYLLPGILG HDPWKQDETYTFGIIQHMLDTGDLIVPTNAGQPFLEKPPLYDWTAAALAKLFGRYLPLHDAARLASALFAALAFGFMARA ARIASGARRWFDLDVIGPVALCAGTLVVVKHVHDMMTDVALMAGTAIAFSSLLELVTARCGGRPAGRFAAAGFGAGVGIA LMTKGLFVPLVFGATLAALLVLYPACRSRAFFRSLGVAALVFAPFALIWPIALLLRSETLFMTWFWDNNVGRFFGFSVPR LGAENDKPLFIWRALLTVGFPVGPLAAWALAAGRWRAWRVPAVGLPALFAGIGMIVLQMAATSRQLYILPFIAPLALLAA DAVARLPTRVARGWDYLSRVLFGAAAGLAWYIWSIVTSYHASREPIRWLGRWLPLDWTAPLELPFTLAAVALTIGWLWLL PSLRTTGKWRGALSWATGVLLVWGLIFTLLLPWLDAAKSYRSVFASLDRQLKPQWSEGDCMASLGLGESEAPMLYYFTGI QHRPVANPADTACTWLIVQGLRAVTPEPGAEWQPFWSGARPGDDKELLRVYVRTPQGGAKP
Sequences:
>Translated_621_residues MQGPATPGGARSSAPAPFRHTKGSERPPAGKTSATTQAAMPLADHAWPRVQAAAFALTGLRVWLLVATVACAYLLPGILG HDPWKQDETYTFGIIQHMLDTGDLIVPTNAGQPFLEKPPLYDWTAAALAKLFGRYLPLHDAARLASALFAALAFGFMARA ARIASGARRWFDLDVIGPVALCAGTLVVVKHVHDMMTDVALMAGTAIAFSSLLELVTARCGGRPAGRFAAAGFGAGVGIA LMTKGLFVPLVFGATLAALLVLYPACRSRAFFRSLGVAALVFAPFALIWPIALLLRSETLFMTWFWDNNVGRFFGFSVPR LGAENDKPLFIWRALLTVGFPVGPLAAWALAAGRWRAWRVPAVGLPALFAGIGMIVLQMAATSRQLYILPFIAPLALLAA DAVARLPTRVARGWDYLSRVLFGAAAGLAWYIWSIVTSYHASREPIRWLGRWLPLDWTAPLELPFTLAAVALTIGWLWLL PSLRTTGKWRGALSWATGVLLVWGLIFTLLLPWLDAAKSYRSVFASLDRQLKPQWSEGDCMASLGLGESEAPMLYYFTGI QHRPVANPADTACTWLIVQGLRAVTPEPGAEWQPFWSGARPGDDKELLRVYVRTPQGGAKP >Mature_621_residues MQGPATPGGARSSAPAPFRHTKGSERPPAGKTSATTQAAMPLADHAWPRVQAAAFALTGLRVWLLVATVACAYLLPGILG HDPWKQDETYTFGIIQHMLDTGDLIVPTNAGQPFLEKPPLYDWTAAALAKLFGRYLPLHDAARLASALFAALAFGFMARA ARIASGARRWFDLDVIGPVALCAGTLVVVKHVHDMMTDVALMAGTAIAFSSLLELVTARCGGRPAGRFAAAGFGAGVGIA LMTKGLFVPLVFGATLAALLVLYPACRSRAFFRSLGVAALVFAPFALIWPIALLLRSETLFMTWFWDNNVGRFFGFSVPR LGAENDKPLFIWRALLTVGFPVGPLAAWALAAGRWRAWRVPAVGLPALFAGIGMIVLQMAATSRQLYILPFIAPLALLAA DAVARLPTRVARGWDYLSRVLFGAAAGLAWYIWSIVTSYHASREPIRWLGRWLPLDWTAPLELPFTLAAVALTIGWLWLL PSLRTTGKWRGALSWATGVLLVWGLIFTLLLPWLDAAKSYRSVFASLDRQLKPQWSEGDCMASLGLGESEAPMLYYFTGI QHRPVANPADTACTWLIVQGLRAVTPEPGAEWQPFWSGARPGDDKELLRVYVRTPQGGAKP
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67247; Mature: 67247
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGPATPGGARSSAPAPFRHTKGSERPPAGKTSATTQAAMPLADHAWPRVQAAAFALTGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHH RVWLLVATVACAYLLPGILGHDPWKQDETYTFGIIQHMLDTGDLIVPTNAGQPFLEKPPL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCC YDWTAAALAKLFGRYLPLHDAARLASALFAALAFGFMARAARIASGARRWFDLDVIGPVA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH LCAGTLVVVKHVHDMMTDVALMAGTAIAFSSLLELVTARCGGRPAGRFAAAGFGAGVGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHH LMTKGLFVPLVFGATLAALLVLYPACRSRAFFRSLGVAALVFAPFALIWPIALLLRSETL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FMTWFWDNNVGRFFGFSVPRLGAENDKPLFIWRALLTVGFPVGPLAAWALAAGRWRAWRV EEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEC PAVGLPALFAGIGMIVLQMAATSRQLYILPFIAPLALLAADAVARLPTRVARGWDYLSRV CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGAAAGLAWYIWSIVTSYHASREPIRWLGRWLPLDWTAPLELPFTLAAVALTIGWLWLL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH PSLRTTGKWRGALSWATGVLLVWGLIFTLLLPWLDAAKSYRSVFASLDRQLKPQWSEGDC HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE MASLGLGESEAPMLYYFTGIQHRPVANPADTACTWLIVQGLRAVTPEPGAEWQPFWSGAR EEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PGDDKELLRVYVRTPQGGAKP CCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MQGPATPGGARSSAPAPFRHTKGSERPPAGKTSATTQAAMPLADHAWPRVQAAAFALTGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHHHH RVWLLVATVACAYLLPGILGHDPWKQDETYTFGIIQHMLDTGDLIVPTNAGQPFLEKPPL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCC YDWTAAALAKLFGRYLPLHDAARLASALFAALAFGFMARAARIASGARRWFDLDVIGPVA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH LCAGTLVVVKHVHDMMTDVALMAGTAIAFSSLLELVTARCGGRPAGRFAAAGFGAGVGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHH LMTKGLFVPLVFGATLAALLVLYPACRSRAFFRSLGVAALVFAPFALIWPIALLLRSETL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE FMTWFWDNNVGRFFGFSVPRLGAENDKPLFIWRALLTVGFPVGPLAAWALAAGRWRAWRV EEEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEC PAVGLPALFAGIGMIVLQMAATSRQLYILPFIAPLALLAADAVARLPTRVARGWDYLSRV CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGAAAGLAWYIWSIVTSYHASREPIRWLGRWLPLDWTAPLELPFTLAAVALTIGWLWLL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH PSLRTTGKWRGALSWATGVLLVWGLIFTLLLPWLDAAKSYRSVFASLDRQLKPQWSEGDC HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE MASLGLGESEAPMLYYFTGIQHRPVANPADTACTWLIVQGLRAVTPEPGAEWQPFWSGAR EEECCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC PGDDKELLRVYVRTPQGGAKP CCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA