| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028179
Identifier: 238028179
GI number: 238028179
Start: 2997574
End: 2997975
Strand: Direct
Name: 238028179
Synonym: bglu_1g26310
Alternate gene names: NA
Gene position: 2997574-2997975 (Clockwise)
Preceding gene: 238028167
Following gene: 238028182
Centisome position: 76.73
GC content: 65.67
Gene sequence:
>402_bases ATGCGTATTTCCGTTGTCGCAACCCTCCTGCTTGCCCTTGCGTCCACCGCGCACGCCGCCACGTCCGTCACGGTCGACGG GCGGTCGAATTGCATCCAGAGCGCGCTCTCGCCAGGCGCCGCCCCCTATGGAACCGCTGCGACGTTTCAACTCGCGCCGG GCCGGTACGTGATGTCGCTCTCGGCGAACAACATGTCCTGCTCGCCCGGTGGCTGTGCGATCACCAGCGTGACCGTGCAG GGCGGCGTCCTGACTGCGAAATGGGGCGTGCCGGTGAGCGCGCAGCCGATCATCGTGGACGTCGGCGGCAGCAGCGCTGC AACCTTGTACGGGTATGTCTCGGACGACATCTGCTCGGACAACGGCGGCCAAGCCACGCTGCTGATCCAGCAAGTGTACT AA
Upstream 100 bases:
>100_bases CAAGATCTGTCTGCGCGCGCCGATATGAATGAGCCGGCCTACTTCGGCCGGCGCGATAGCAAACGTGCAGTCCAAAAAAT TTCAACAAAGGATCCGAGTC
Downstream 100 bases:
>100_bases TCGGGAGCGGCATGCGCCGGGCCCCACGCCCGGCGCATCCTTACCCCAGCCGCCTCACCAGATCGTCGAGCAGCACGCGC GCGGTCGCAACGTTGGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRISVVATLLLALASTAHAATSVTVDGRSNCIQSALSPGAAPYGTAATFQLAPGRYVMSLSANNMSCSPGGCAITSVTVQ GGVLTAKWGVPVSAQPIIVDVGGSSAATLYGYVSDDICSDNGGQATLLIQQVY
Sequences:
>Translated_133_residues MRISVVATLLLALASTAHAATSVTVDGRSNCIQSALSPGAAPYGTAATFQLAPGRYVMSLSANNMSCSPGGCAITSVTVQ GGVLTAKWGVPVSAQPIIVDVGGSSAATLYGYVSDDICSDNGGQATLLIQQVY >Mature_133_residues MRISVVATLLLALASTAHAATSVTVDGRSNCIQSALSPGAAPYGTAATFQLAPGRYVMSLSANNMSCSPGGCAITSVTVQ GGVLTAKWGVPVSAQPIIVDVGGSSAATLYGYVSDDICSDNGGQATLLIQQVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13298; Mature: 13298
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISVVATLLLALASTAHAATSVTVDGRSNCIQSALSPGAAPYGTAATFQLAPGRYVMSL CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEE SANNMSCSPGGCAITSVTVQGGVLTAKWGVPVSAQPIIVDVGGSSAATLYGYVSDDICSD ECCCCCCCCCCEEEEEEEEECCEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCEECC NGGQATLLIQQVY CCCEEEEEEEECC >Mature Secondary Structure MRISVVATLLLALASTAHAATSVTVDGRSNCIQSALSPGAAPYGTAATFQLAPGRYVMSL CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEE SANNMSCSPGGCAITSVTVQGGVLTAKWGVPVSAQPIIVDVGGSSAATLYGYVSDDICSD ECCCCCCCCCCEEEEEEEEECCEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCEECC NGGQATLLIQQVY CCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA