| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is qorA [H]
Identifier: 238028146
GI number: 238028146
Start: 2959046
End: 2960065
Strand: Reverse
Name: qorA [H]
Synonym: bglu_1g25970
Alternate gene names: 238028146
Gene position: 2960065-2959046 (Counterclockwise)
Preceding gene: 238028147
Following gene: 238028145
Centisome position: 75.77
GC content: 69.61
Gene sequence:
>1020_bases ATGAAAGCGATCGAAATCACCGAATTCGGTGCCCCCGACGTCCTCAAGCTCGTCGAGCGGCCCCGGCCCGATCCGAAGCG CGGCGAAGTGCTCATCAAGGTGGCGGCCTTCGGCATCAACCGGCCCGACGTGTTCCAGCGCAAGGGCGCCTACGCGCCGC CGCCGGGCGCCTCGGACCTGCCCGGGCTCGAGGTGGCGGGCGAGATCGTCGACGGCGAGCTCGGCGAGGGCGCGGCGAAC CCGTTCGGTCTGAAGATTGGCGATCGCGTCTGCGCACTACTCGCGGGCGGCGGTTATGCCGAGTACGCGACGGCGCCGCT CGGGCAATGCCTGCCGGTGCCGGCCGGGCTGTCCGACGTCGAGGCGGCGTCGCTGCCGGAGACCTTCTTCACGGTCTGGA GCAACGTGTTCGATCGCGCGCAACTCGGCCGCGGCGAAGGCCGCGACGAGGAGACGTTGCTCGTGCAGGGCGGTTCGAGC GGAATCGGCGTGACGGCGATCCAGATCGCGCATGCGCTGGGCCATCGCGTGTTCGCGACCGCGGGCACCGACGAGAAGTG CCGCGCCTGCGAGGCGCTTGGCGCGGAGCGCGCGATCAACTACAAGACCGAGGATTTCGTCGACGTCGTCAAGTCGCTGA CCAACGACCGCGGCGCCGATGTGATCCTCGACATGGTGGCCGGCCCCTACGTGCCGCGCGAACTGAGCGCGCTCGCGGAT GGCGGACGGCTGGTCGTGATCGCGCTGCTCGGCGGCGCGAAGGCCGAGGTCAGCCTGGGCGAGATCCTGCGCCGCCGGCT CACCATCACCGGGTCGACGCTGCGTCCGCGCCCGGTCGAATTCAAGGCGAAGATCGCCGCGAACCTGAAGGAAACGGTTT GGCCGCTGATCGAGAGCGGCACGGTGCGCCCGGTGATCTATCGTGTGCTGCCGGCCGCCGAAGCGGCGGCCGCGCACGCG CTGATGGAAAGCAGCGAGCACGTCGGCAAGATCGTGCTCGAATGGGGTGCGAGTGCTTGA
Upstream 100 bases:
>100_bases AAAGCGGCCGGCGCCTGAACGGGCCGGCCGTTTTTCATGCAGGATGGACGGGCTTGCGCCGATTCCGGCGCAAGCCCGTC CCTATCTTGGAGCGACGCAA
Downstream 100 bases:
>100_bases CATTCGCGGTTTGACCGGTTCTCGTGCGTCGAAGTAAAATCGCGGGTTTGCTTCGTCGGATCCAGGCCCTGGCGGTTCGC GCAGGGGCCGATTGCGAGGC
Product: alcohol dehydrogenase, zinc-binding domain-containing protein
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKAIEITEFGAPDVLKLVERPRPDPKRGEVLIKVAAFGINRPDVFQRKGAYAPPPGASDLPGLEVAGEIVDGELGEGAAN PFGLKIGDRVCALLAGGGYAEYATAPLGQCLPVPAGLSDVEAASLPETFFTVWSNVFDRAQLGRGEGRDEETLLVQGGSS GIGVTAIQIAHALGHRVFATAGTDEKCRACEALGAERAINYKTEDFVDVVKSLTNDRGADVILDMVAGPYVPRELSALAD GGRLVVIALLGGAKAEVSLGEILRRRLTITGSTLRPRPVEFKAKIAANLKETVWPLIESGTVRPVIYRVLPAAEAAAAHA LMESSEHVGKIVLEWGASA
Sequences:
>Translated_339_residues MKAIEITEFGAPDVLKLVERPRPDPKRGEVLIKVAAFGINRPDVFQRKGAYAPPPGASDLPGLEVAGEIVDGELGEGAAN PFGLKIGDRVCALLAGGGYAEYATAPLGQCLPVPAGLSDVEAASLPETFFTVWSNVFDRAQLGRGEGRDEETLLVQGGSS GIGVTAIQIAHALGHRVFATAGTDEKCRACEALGAERAINYKTEDFVDVVKSLTNDRGADVILDMVAGPYVPRELSALAD GGRLVVIALLGGAKAEVSLGEILRRRLTITGSTLRPRPVEFKAKIAANLKETVWPLIESGTVRPVIYRVLPAAEAAAAHA LMESSEHVGKIVLEWGASA >Mature_339_residues MKAIEITEFGAPDVLKLVERPRPDPKRGEVLIKVAAFGINRPDVFQRKGAYAPPPGASDLPGLEVAGEIVDGELGEGAAN PFGLKIGDRVCALLAGGGYAEYATAPLGQCLPVPAGLSDVEAASLPETFFTVWSNVFDRAQLGRGEGRDEETLLVQGGSS GIGVTAIQIAHALGHRVFATAGTDEKCRACEALGAERAINYKTEDFVDVVKSLTNDRGADVILDMVAGPYVPRELSALAD GGRLVVIALLGGAKAEVSLGEILRRRLTITGSTLRPRPVEFKAKIAANLKETVWPLIESGTVRPVIYRVLPAAEAAAAHA LMESSEHVGKIVLEWGASA
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=338, Percent_Identity=38.1656804733728, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI22538444, Length=338, Percent_Identity=38.1656804733728, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI194239674, Length=336, Percent_Identity=33.0357142857143, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI13236495, Length=336, Percent_Identity=33.0357142857143, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI194239676, Length=336, Percent_Identity=29.7619047619048, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI18379349, Length=350, Percent_Identity=26.8571428571429, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI24308257, Length=353, Percent_Identity=26.0623229461756, Blast_Score=98, Evalue=1e-20, Organism=Homo sapiens, GI197927207, Length=184, Percent_Identity=31.5217391304348, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI28557745, Length=286, Percent_Identity=29.020979020979, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI41872631, Length=256, Percent_Identity=29.6875, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI47519420, Length=362, Percent_Identity=25.1381215469613, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1790485, Length=338, Percent_Identity=30.1775147928994, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787863, Length=363, Percent_Identity=25.3443526170799, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17507255, Length=347, Percent_Identity=29.1066282420749, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6319520, Length=345, Percent_Identity=28.695652173913, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323961, Length=292, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=8e-12, Organism=Drosophila melanogaster, GI24581345, Length=325, Percent_Identity=24.9230769230769, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI221330659, Length=252, Percent_Identity=25, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920632, Length=252, Percent_Identity=25, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35636; Mature: 35636
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIEITEFGAPDVLKLVERPRPDPKRGEVLIKVAAFGINRPDVFQRKGAYAPPPGASDL CCCEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCC PGLEVAGEIVDGELGEGAANPFGLKIGDRVCALLAGGGYAEYATAPLGQCLPVPAGLSDV CCHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCC EAASLPETFFTVWSNVFDRAQLGRGEGRDEETLLVQGGSSGIGVTAIQIAHALGHRVFAT HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEE AGTDEKCRACEALGAERAINYKTEDFVDVVKSLTNDRGADVILDMVAGPYVPRELSALAD CCCCHHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCC GGRLVVIALLGGAKAEVSLGEILRRRLTITGSTLRPRPVEFKAKIAANLKETVWPLIESG CCCEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC TVRPVIYRVLPAAEAAAAHALMESSEHVGKIVLEWGASA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC >Mature Secondary Structure MKAIEITEFGAPDVLKLVERPRPDPKRGEVLIKVAAFGINRPDVFQRKGAYAPPPGASDL CCCEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCC PGLEVAGEIVDGELGEGAANPFGLKIGDRVCALLAGGGYAEYATAPLGQCLPVPAGLSDV CCHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCC EAASLPETFFTVWSNVFDRAQLGRGEGRDEETLLVQGGSSGIGVTAIQIAHALGHRVFAT HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEEE AGTDEKCRACEALGAERAINYKTEDFVDVVKSLTNDRGADVILDMVAGPYVPRELSALAD CCCCHHHHHHHHHCHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCC GGRLVVIALLGGAKAEVSLGEILRRRLTITGSTLRPRPVEFKAKIAANLKETVWPLIESG CCCEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC TVRPVIYRVLPAAEAAAAHALMESSEHVGKIVLEWGASA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]