| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028129
Identifier: 238028129
GI number: 238028129
Start: 2942156
End: 2942455
Strand: Reverse
Name: 238028129
Synonym: bglu_1g25800
Alternate gene names: NA
Gene position: 2942455-2942156 (Counterclockwise)
Preceding gene: 238028130
Following gene: 238028128
Centisome position: 75.32
GC content: 65.0
Gene sequence:
>300_bases ATGTCCGCGGCCGGCTGGTTCATCGTGCTGCTGGCGCTTGCCGGCGCCAACCTGCCGTTCTTGAATCAACGCCTGTTCGC CGTCGTGCCGGTTGGTGCCGGCACGCGCAAGAGTGCCTGGCTGCGGATCGGCGAGATGCTCGCGCTGTATTTCGCGGTCG GCATGCTCGGCTTCTGGCTCGAGGCGCGCGCCGGCAACCGCTTCGAGCAGGGCTGGCAGTTCTACGCGATCACCCTCAGC CTGTTCGTGGTGTTCGCGTTCCCGGGCTTCACGTTTCAGTATCTCGTCAAACGACGCTGA
Upstream 100 bases:
>100_bases TGCTGCTGCTCAACGGCGCTGCCGTGGTGGTGCTCGGTGTCGCGCCCAGCAGGCTGATCGAAATCTGCCTGCAGGCGATC ACCCACACGCTGCCGCTCTG
Downstream 100 bases:
>100_bases CGGTTCCGGCCGTCGCGTCCTACTCTGGAGCCGACGATGGCCGAATTACCGAATCACGACGCGCAGTTGACCGAAGTCCG CGTCGAAAGCCAATCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSAAGWFIVLLALAGANLPFLNQRLFAVVPVGAGTRKSAWLRIGEMLALYFAVGMLGFWLEARAGNRFEQGWQFYAITLS LFVVFAFPGFTFQYLVKRR
Sequences:
>Translated_99_residues MSAAGWFIVLLALAGANLPFLNQRLFAVVPVGAGTRKSAWLRIGEMLALYFAVGMLGFWLEARAGNRFEQGWQFYAITLS LFVVFAFPGFTFQYLVKRR >Mature_98_residues SAAGWFIVLLALAGANLPFLNQRLFAVVPVGAGTRKSAWLRIGEMLALYFAVGMLGFWLEARAGNRFEQGWQFYAITLSL FVVFAFPGFTFQYLVKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11142; Mature: 11011
Theoretical pI: Translated: 11.41; Mature: 11.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAGWFIVLLALAGANLPFLNQRLFAVVPVGAGTRKSAWLRIGEMLALYFAVGMLGFWL CCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EARAGNRFEQGWQFYAITLSLFVVFAFPGFTFQYLVKRR HHCCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure SAAGWFIVLLALAGANLPFLNQRLFAVVPVGAGTRKSAWLRIGEMLALYFAVGMLGFWL CCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EARAGNRFEQGWQFYAITLSLFVVFAFPGFTFQYLVKRR HHCCCCCCHHCHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA