| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yetK [H]
Identifier: 238028086
GI number: 238028086
Start: 2897389
End: 2898291
Strand: Direct
Name: yetK [H]
Synonym: bglu_1g25370
Alternate gene names: 238028086
Gene position: 2897389-2898291 (Clockwise)
Preceding gene: 238028079
Following gene: 238028087
Centisome position: 74.17
GC content: 69.1
Gene sequence:
>903_bases TTGAATCGCTACGCTCTCTGTCTGATTCTGTCGATGCTGCTGGTCGGCAGCAACGTCGGTGTCGGCAAGTCCATCGTCGT GGCGATGCCCGTCGCGATCCTCGCCACGCTGCGCTTCGTGATCGCCAACGCGGTGCTCTGGCCGCTCTGGCAGCCGTCGA AGATGCGCGCGGTGAGCCGCGCCGAATGGCTGAACCTGTTCCTGCAGGCGCTGTTCGGCACCTTCCTGTTCACGCTGCTG ATGCTCAACGGCGTGCAGCGTACCAGCGCGGTGGCGGCCGGCGTGATCACCAGCACCATCCCCGCCGTGGTCGCGCTGTT CTCCTGGCTGTTCCTGGGTGAGCGCCCCGACGGCCGGGCACTGCTCTCGATCGCGCTCGCCATCGTCGGCGTGCTCGCCC TCAACGTGGTCCAGAGCCAGGGCCAGCCGGGCGGCGCGGCGCCGGGCGGCTCGCTCGCGGGCAACCTGCTGATCCTCGGC GCGGTATGCTGCGAATCGTTCTACGTGATCCTGTCGCGCCGGCTCACCAGGACGCTGCGCGCGCTCGACATCTGCGCCTA CACGCACCTGTTCGGCATGCTGCTGATGCTGCCGCTCGGGCTGCTGGCGCTGCCGCACTTCGACTACGCGGCGGTGCCGG CCGGCATCTGGGCGCTGGTCGTCTGGTATGCGCTCGCCGCCAGCATCTTCTCGTTTACGCTATGGATGATCGGCATCCGG CACATGCCGGGCAGCCTGGCCGGCGTGTTCAGCGCGGTGCTGCCGATCTCGGCCGCCGTCTACGGGATCGCGTTCCTCGG CGAGCGCCCGACGCTCGCGCACGGCTTCGCGCTGGCCTGCGTCGTCACCGGCATCCTGCTCGCCAGCCTGAAGCCGCGCC GCACGCCGAACTCGCTGTCCTGA
Upstream 100 bases:
>100_bases CGACACGATAAGCCGCGCAACTTACCCGTCACTTACGCACCCCGGCCGGCGCCGCGCGGGTCGCTACAATGCTAACTGAA CTCAACGCCCGGATTCCAGC
Downstream 100 bases:
>100_bases CCGCGCGGCCGGCCCGGCGCGCCGACGCCGTCCGCCCGGCGGGCACGTTACAATAGCGCCCTTCCGGCACGTCCCCCAAG ACACACGCGCTCCAAGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MNRYALCLILSMLLVGSNVGVGKSIVVAMPVAILATLRFVIANAVLWPLWQPSKMRAVSRAEWLNLFLQALFGTFLFTLL MLNGVQRTSAVAAGVITSTIPAVVALFSWLFLGERPDGRALLSIALAIVGVLALNVVQSQGQPGGAAPGGSLAGNLLILG AVCCESFYVILSRRLTRTLRALDICAYTHLFGMLLMLPLGLLALPHFDYAAVPAGIWALVVWYALAASIFSFTLWMIGIR HMPGSLAGVFSAVLPISAAVYGIAFLGERPTLAHGFALACVVTGILLASLKPRRTPNSLS
Sequences:
>Translated_300_residues MNRYALCLILSMLLVGSNVGVGKSIVVAMPVAILATLRFVIANAVLWPLWQPSKMRAVSRAEWLNLFLQALFGTFLFTLL MLNGVQRTSAVAAGVITSTIPAVVALFSWLFLGERPDGRALLSIALAIVGVLALNVVQSQGQPGGAAPGGSLAGNLLILG AVCCESFYVILSRRLTRTLRALDICAYTHLFGMLLMLPLGLLALPHFDYAAVPAGIWALVVWYALAASIFSFTLWMIGIR HMPGSLAGVFSAVLPISAAVYGIAFLGERPTLAHGFALACVVTGILLASLKPRRTPNSLS >Mature_300_residues MNRYALCLILSMLLVGSNVGVGKSIVVAMPVAILATLRFVIANAVLWPLWQPSKMRAVSRAEWLNLFLQALFGTFLFTLL MLNGVQRTSAVAAGVITSTIPAVVALFSWLFLGERPDGRALLSIALAIVGVLALNVVQSQGQPGGAAPGGSLAGNLLILG AVCCESFYVILSRRLTRTLRALDICAYTHLFGMLLMLPLGLLALPHFDYAAVPAGIWALVVWYALAASIFSFTLWMIGIR HMPGSLAGVFSAVLPISAAVYGIAFLGERPTLAHGFALACVVTGILLASLKPRRTPNSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31832; Mature: 31832
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYALCLILSMLLVGSNVGVGKSIVVAMPVAILATLRFVIANAVLWPLWQPSKMRAVSR CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AEWLNLFLQALFGTFLFTLLMLNGVQRTSAVAAGVITSTIPAVVALFSWLFLGERPDGRA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLSIALAIVGVLALNVVQSQGQPGGAAPGGSLAGNLLILGAVCCESFYVILSRRLTRTLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDICAYTHLFGMLLMLPLGLLALPHFDYAAVPAGIWALVVWYALAASIFSFTLWMIGIR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMPGSLAGVFSAVLPISAAVYGIAFLGERPTLAHGFALACVVTGILLASLKPRRTPNSLS HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNRYALCLILSMLLVGSNVGVGKSIVVAMPVAILATLRFVIANAVLWPLWQPSKMRAVSR CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH AEWLNLFLQALFGTFLFTLLMLNGVQRTSAVAAGVITSTIPAVVALFSWLFLGERPDGRA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LLSIALAIVGVLALNVVQSQGQPGGAAPGGSLAGNLLILGAVCCESFYVILSRRLTRTLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDICAYTHLFGMLLMLPLGLLALPHFDYAAVPAGIWALVVWYALAASIFSFTLWMIGIR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HMPGSLAGVFSAVLPISAAVYGIAFLGERPTLAHGFALACVVTGILLASLKPRRTPNSLS HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]