Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028079

Identifier: 238028079

GI number: 238028079

Start: 2881503

End: 2881826

Strand: Direct

Name: 238028079

Synonym: bglu_1g25300

Alternate gene names: NA

Gene position: 2881503-2881826 (Clockwise)

Preceding gene: 238028073

Following gene: 238028086

Centisome position: 73.76

GC content: 64.2

Gene sequence:

>324_bases
ATGCGGATTGACCACCTGCAGGCCCGAAGCAGCCGCGACGGCCTGCACGATCTTCGACTCGGTGATGCTGGCCTTGAAGA
ATCGGATCAAATCGAACAGCACCGCGACTCCCTCGATGCGCCCGCTGTTGACGTCGAACACGCATTGGGCGGCGTAACCG
CACAGCGAAACGGGTTTCGTCACGCGATAGCGCAAAGCGCCGTTCGGTACGCTTTCCGGGGCGTCACACAAGGCCCGAAG
GTCGTGGGCCAGCGCGCCGGACGCGTCGACCGCGATCCGGACCCGCTCGAGGTCCACCGCTCCGGTCGCCCAATCAATAT
GTAG

Upstream 100 bases:

>100_bases
CTCATGCGTATTGGAGGTCGAGCGTCAGGTCGCCCTGGCGCGGGTCGAAACTGAACAGCGCGGTGCCCCAAGCGCACGGT
TCCAATCTCGCCTTGGCCGG

Downstream 100 bases:

>100_bases
TGCCAGCGTCATTTCGAATAACCGATGATTTTTCCCGTATCGATCAGGTTGGCCTTGTCCTGATTCTCCAGAAAGTACTG
CGTCGCGCCACCGGCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRIDHLQARSSRDGLHDLRLGDAGLEESDQIEQHRDSLDAPAVDVEHALGGVTAQRNGFRHAIAQSAVRYAFRGVTQGPK
VVGQRAGRVDRDPDPLEVHRSGRPINM

Sequences:

>Translated_107_residues
MRIDHLQARSSRDGLHDLRLGDAGLEESDQIEQHRDSLDAPAVDVEHALGGVTAQRNGFRHAIAQSAVRYAFRGVTQGPK
VVGQRAGRVDRDPDPLEVHRSGRPINM
>Mature_107_residues
MRIDHLQARSSRDGLHDLRLGDAGLEESDQIEQHRDSLDAPAVDVEHALGGVTAQRNGFRHAIAQSAVRYAFRGVTQGPK
VVGQRAGRVDRDPDPLEVHRSGRPINM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11782; Mature: 11782

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIDHLQARSSRDGLHDLRLGDAGLEESDQIEQHRDSLDAPAVDVEHALGGVTAQRNGFR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHH
HAIAQSAVRYAFRGVTQGPKVVGQRAGRVDRDPDPLEVHRSGRPINM
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCC
>Mature Secondary Structure
MRIDHLQARSSRDGLHDLRLGDAGLEESDQIEQHRDSLDAPAVDVEHALGGVTAQRNGFR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHH
HAIAQSAVRYAFRGVTQGPKVVGQRAGRVDRDPDPLEVHRSGRPINM
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA