| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027750
Identifier: 238027750
GI number: 238027750
Start: 2360643
End: 2361305
Strand: Reverse
Name: 238027750
Synonym: bglu_1g21710
Alternate gene names: NA
Gene position: 2361305-2360643 (Counterclockwise)
Preceding gene: 238027755
Following gene: 238027745
Centisome position: 60.45
GC content: 61.39
Gene sequence:
>663_bases TTGGAACCACTTGCCGACTCGTCTGGGCTTTGGCTCGGGCGCCACATGCTGGCGGCGATTGAGCGACTGGCAAAAGGCTG GTGTATGGGACCAACTGCACGAGTTGCTACTCGACAAGTTGCGTGCGGCCGGCCAAATCGATCTGTCATACGCTGCGGTC GATTCGTCGTCCGTGCGCGCCGTTGGGGCGGGCGAAAAACTGGCCCGAACCCCACCGATCGCGCGCGACCCGGTTCCAAG CACCACGTCCTCGTAGACGCCAACGGCGTTCCTCTCGTTGCGATCCTGACTGGCGCGAACACCAACGACGTCACGCAGTT GCTGCCGCTCGTTGATGCGATTCCACCCATTCGCGGCGTTCGTGGCCGACCGCTTCAGAAGCCCGGCGTCGTCTACGCCG ATCGCGGCTACGATTCCACCCGACATCGTCGCGCGTTGCGCGAACGCGGTATCAAGCCCGTGATCGCCAAGCGCCGGACC GAGCATGGCAGTGGTCTGGGCAAGTATCGTTGGGTGGTCGAACGTACGCATTCCTGGCTCCACAATTTCCGGCGCCTACG CACTCGCTTCGAGCGACGTGCCTACATTCACGAAGCATTCCTCAAACTTGGCTGCTCGATCATCTGTTGGAACATCTTCA GACGAGCTGAGCAGGGTTTTTGA
Upstream 100 bases:
>100_bases CACCTGCGAAGCTTCGAGCGAAGAGCGATCCTGGTCGCCCGCGCGTGTCCGACCGTGCGGCTCTCAACGGCATCCTGTTC GTGTTCAAAACGGGAATTCG
Downstream 100 bases:
>100_bases ACTGGCCTCTTATCCGGACATCCGTCTGAACGTTCGCGAGAGTCAATTGGGCGAGGTTGAGACGTGGCTGGACAGTGGAC GCGTGGACCTCGCTATCCTT
Product: transposase IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSK HHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRT EHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHEAFLKLGCSIICWNIFRRAEQGF
Sequences:
>Translated_220_residues MEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSK HHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRT EHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHEAFLKLGCSIICWNIFRRAEQGF >Mature_220_residues MEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRARRWGGRKTGPNPTDRARPGSK HHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGVRGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRT EHGSGLGKYRWVVERTHSWLHNFRRLRTRFERRAYIHEAFLKLGCSIICWNIFRRAEQGF
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 24963; Mature: 24963
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRAR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGV HCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCC RGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWL CCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH HNFRRLRTRFERRAYIHEAFLKLGCSIICWNIFRRAEQGF HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEPLADSSGLWLGRHMLAAIERLAKGWCMGPTARVATRQVACGRPNRSVIRCGRFVVRAR CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RWGGRKTGPNPTDRARPGSKHHVLVDANGVPLVAILTGANTNDVTQLLPLVDAIPPIRGV HCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCC RGRPLQKPGVVYADRGYDSTRHRRALRERGIKPVIAKRRTEHGSGLGKYRWVVERTHSWL CCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHH HNFRRLRTRFERRAYIHEAFLKLGCSIICWNIFRRAEQGF HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]