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The map label for this gene is rbn [C]

Identifier: 238027745

GI number: 238027745

Start: 2354886

End: 2356190

Strand: Reverse

Name: rbn [C]

Synonym: bglu_1g21660

Alternate gene names: 238027745

Gene position: 2356190-2354886 (Counterclockwise)

Preceding gene: 238027750

Following gene: 238027743

Centisome position: 60.31

GC content: 69.27

Gene sequence:

>1305_bases
TTGCCGAAGCTCAGCGTCGACCTCGACACCATCAAACGCCTTGCCCGTTTCGCCGCCCGGCGCGGCGGAGAGGATCGGAT
CCCGCAGGTGGCGGGCAGCCTGACCTTCACCACGATCCTCGCGCTGGTGCCGCTCGTCACCGTCGCGTTCGCGCTGTTCA
CCGCGTTTCCGATCTTCTCGTCGTTCCAGGCGTCGCTGCAGAGTTTCCTCGCCGATCACCTGATGCCGGCGCAGATCAAC
AACCAGATCTTCAAGTACCTGAATCAGTTCTCCGCGAAGGCCAAGGGGCTGACCACGGCCGGCCTGATCGTGCTCGTCGT
GACCGCGGTGATGACGATGATGACGATCGAGTCGGCGTTCAACGTGATCTGGCGCGTGCGCAAGCCGCGGCCGTTCGCGC
AGCGCGTGCTGGCCTACTGGGCGTTCATCACGCTCGGGCCGCTGCTGTTCGGCGTGAGCCTGTCGATCTCGTCGTACCTG
TTCACCAAGTCGCTCGCGTTCGCCGGTGCGCCGGCCACGCCGTCGTCGTTCGAATGGCTGCTCACGGCCGCCTCGCTGCC
GCTGACGGTGGTCGCCTTCACGCTGCTCTACGTCTATCTGCCGAACTGCACGGTGGCCTGGCGCGACGCGGTGGTGGGCG
GCGTCTGCGCGGCGCTCGCGTTCGAACTCGCCAAGCGCGGCTTCGGCTATTACGTGCGGCGCATTCCCACCTACACGGCC
GTATACGGCGCGTTCGCGGCGGTGCCGCTGTTCCTGCTCTGGGTCTACCTGAGCTGGCTCATCACGCTGGCGGGCGCGAT
GATCGCCTCGGCGCTGCCGGCGATCCGCATCGGCCAGTTCCACCGGATCGGCTACCCCGGCAGCGACCTGCTCGATGCGC
TGGCCCTGCTGGCGCGGCTCGCCGAGGCGCGCGAACAGGGCCGGCCCGGCCGTTCGGTGGCGCGGCTCGCGGTGATGGTG
CGCTGCGGCATGGAAACCGCCCAGCGGCTGCTGGCGACGATGGAGGAGCGTGAATGGATGATGCGGCTGGACAGCAGCGG
CGGCGGGCCGATGATCTACATCATGCTGGTGAGCACGGAGCAGCTGATGCTCGGGCAGTTGTTCGACGCCTTCGTGGTCG
ATCGCGACGAGCTGATGTACCAGCTCCAGCGCGGGCGCGCCGTGCTCGACGGCGAGGCGCTGCTGCGCGCGCTGGCGGGC
GAGGGGCTCGGCGTGACGCTCGCCGAACTGCTCGTGAACCGCGCCGCGCCGGAAGCGGGCGGCGAGGGCGCGCCGGCTGC
CGCGCCGCCGCCCCGAACGGCGTGA

Upstream 100 bases:

>100_bases
ACCAGGATGTCTTTCATAGGCTTCGAGAGTGAGCGGCTATTATAGGGGGGCGACCGCCGCGACGCGCGGCGGCGTGCATG
TTGCCCGAAGGAGAAAGCCG

Downstream 100 bases:

>100_bases
GCGGCGGGGCCCCGCCGGCCGTCCCGCGGCGTCGCGAGCCCCGCTGCCGGAAGCGCAATACGACGCCCCGGGCCGCCGGG
GCCGGCGCAAACGGCCGCGC

Product: YihY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MPKLSVDLDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFSSFQASLQSFLADHLMPAQIN
NQIFKYLNQFSAKAKGLTTAGLIVLVVTAVMTMMTIESAFNVIWRVRKPRPFAQRVLAYWAFITLGPLLFGVSLSISSYL
FTKSLAFAGAPATPSSFEWLLTAASLPLTVVAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTA
VYGAFAAVPLFLLWVYLSWLITLAGAMIASALPAIRIGQFHRIGYPGSDLLDALALLARLAEAREQGRPGRSVARLAVMV
RCGMETAQRLLATMEEREWMMRLDSSGGGPMIYIMLVSTEQLMLGQLFDAFVVDRDELMYQLQRGRAVLDGEALLRALAG
EGLGVTLAELLVNRAAPEAGGEGAPAAAPPPRTA

Sequences:

>Translated_434_residues
MPKLSVDLDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFSSFQASLQSFLADHLMPAQIN
NQIFKYLNQFSAKAKGLTTAGLIVLVVTAVMTMMTIESAFNVIWRVRKPRPFAQRVLAYWAFITLGPLLFGVSLSISSYL
FTKSLAFAGAPATPSSFEWLLTAASLPLTVVAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTA
VYGAFAAVPLFLLWVYLSWLITLAGAMIASALPAIRIGQFHRIGYPGSDLLDALALLARLAEAREQGRPGRSVARLAVMV
RCGMETAQRLLATMEEREWMMRLDSSGGGPMIYIMLVSTEQLMLGQLFDAFVVDRDELMYQLQRGRAVLDGEALLRALAG
EGLGVTLAELLVNRAAPEAGGEGAPAAAPPPRTA
>Mature_433_residues
PKLSVDLDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFSSFQASLQSFLADHLMPAQINN
QIFKYLNQFSAKAKGLTTAGLIVLVVTAVMTMMTIESAFNVIWRVRKPRPFAQRVLAYWAFITLGPLLFGVSLSISSYLF
TKSLAFAGAPATPSSFEWLLTAASLPLTVVAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAV
YGAFAAVPLFLLWVYLSWLITLAGAMIASALPAIRIGQFHRIGYPGSDLLDALALLARLAEAREQGRPGRSVARLAVMVR
CGMETAQRLLATMEEREWMMRLDSSGGGPMIYIMLVSTEQLMLGQLFDAFVVDRDELMYQLQRGRAVLDGEALLRALAGE
GLGVTLAELLVNRAAPEAGGEGAPAAAPPPRTA

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=257, Percent_Identity=40.8560311284047, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 47117; Mature: 46986

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLSVDLDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFS
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFQASLQSFLADHLMPAQINNQIFKYLNQFSAKAKGLTTAGLIVLVVTAVMTMMTIESAF
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
NVIWRVRKPRPFAQRVLAYWAFITLGPLLFGVSLSISSYLFTKSLAFAGAPATPSSFEWL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LTAASLPLTVVAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTA
HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
VYGAFAAVPLFLLWVYLSWLITLAGAMIASALPAIRIGQFHRIGYPGSDLLDALALLARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
AEAREQGRPGRSVARLAVMVRCGMETAQRLLATMEEREWMMRLDSSGGGPMIYIMLVSTE
HHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHH
QLMLGQLFDAFVVDRDELMYQLQRGRAVLDGEALLRALAGEGLGVTLAELLVNRAAPEAG
HHHHHHHHHHHHHCHHHHHHHHHHCCEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
GEGAPAAAPPPRTA
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PKLSVDLDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFS
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA