| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027669
Identifier: 238027669
GI number: 238027669
Start: 2279682
End: 2280251
Strand: Reverse
Name: 238027669
Synonym: bglu_1g20900
Alternate gene names: NA
Gene position: 2280251-2279682 (Counterclockwise)
Preceding gene: 238027670
Following gene: 238027668
Centisome position: 58.37
GC content: 62.46
Gene sequence:
>570_bases ATGTTCTCACTCGACAACACCCTCGCGAAAATCGTGTCGTGCACCAACGTGAGCGAGAAGCACGGCGCTGAGCGCGTCGC CGCGATCTCGATCGGCCTCTACGTCGTGCAAGGCGGCGAAGTGCTCGAGATGTTCGACTCGGCGCTGCGCAACGCGCTCT ATCGCAAGCCGCTGCCGAAGCCGGGCGAATTGCCGATGGATCACGACGGCCTGACCGAGCTGCGCTTCCCGTTCATGCGT CAGATGGCCTGGGAGCGTAAATACGAAGGGTACTTGCTGCGCTTCCACATCGGAGCGAGTGGCGTCGAGGATGTGCTGTT GTCCGAGTGCGGCCTGAAGGACATCCGCTTCACGACTCAGGAGGGCGGTAGCGTCGGCGTGCACTTCAAGATCACCGCGC ACCCGAAGGACGAAATCGATCACGGCAAGGTCGCCACGCGCCTGCAGCAGGAGATCGGTATCACGCTGACGCCGCCGGAC GACTACGTCGACCCGGGTTTGTTCGGCACTCCGGAGCCCGACTACGTACCGTTCGAAGGATCTGACCTCGAGCAGCAAGA GCAGGACTGA
Upstream 100 bases:
>100_bases CGCGCATCGACGAGGCCTACAACCAGCGCCGCGAAACGCTTCTCGGCGCGTAACGACAAAACCGTCGACAAATTATTCCG GAAATATTCCAGGAGCCACC
Downstream 100 bases:
>100_bases ATCGCTACCCCCGTAGCGTGTCTTTGAGCCGGCGCCAGTACGGGCCGGTCTTTTTCCGGCTTCATCGAAAGCCGCGTGCA TCGAGCCGCGCGCCCTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MFSLDNTLAKIVSCTNVSEKHGAERVAAISIGLYVVQGGEVLEMFDSALRNALYRKPLPKPGELPMDHDGLTELRFPFMR QMAWERKYEGYLLRFHIGASGVEDVLLSECGLKDIRFTTQEGGSVGVHFKITAHPKDEIDHGKVATRLQQEIGITLTPPD DYVDPGLFGTPEPDYVPFEGSDLEQQEQD
Sequences:
>Translated_189_residues MFSLDNTLAKIVSCTNVSEKHGAERVAAISIGLYVVQGGEVLEMFDSALRNALYRKPLPKPGELPMDHDGLTELRFPFMR QMAWERKYEGYLLRFHIGASGVEDVLLSECGLKDIRFTTQEGGSVGVHFKITAHPKDEIDHGKVATRLQQEIGITLTPPD DYVDPGLFGTPEPDYVPFEGSDLEQQEQD >Mature_189_residues MFSLDNTLAKIVSCTNVSEKHGAERVAAISIGLYVVQGGEVLEMFDSALRNALYRKPLPKPGELPMDHDGLTELRFPFMR QMAWERKYEGYLLRFHIGASGVEDVLLSECGLKDIRFTTQEGGSVGVHFKITAHPKDEIDHGKVATRLQQEIGITLTPPD DYVDPGLFGTPEPDYVPFEGSDLEQQEQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21081; Mature: 21081
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLDNTLAKIVSCTNVSEKHGAERVAAISIGLYVVQGGEVLEMFDSALRNALYRKPLPK CCCCHHHHHHHHHHCCCHHHHCHHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCC PGELPMDHDGLTELRFPFMRQMAWERKYEGYLLRFHIGASGVEDVLLSECGLKDIRFTTQ CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECC EGGSVGVHFKITAHPKDEIDHGKVATRLQQEIGITLTPPDDYVDPGLFGTPEPDYVPFEG CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC SDLEQQEQD CCCCCCCCC >Mature Secondary Structure MFSLDNTLAKIVSCTNVSEKHGAERVAAISIGLYVVQGGEVLEMFDSALRNALYRKPLPK CCCCHHHHHHHHHHCCCHHHHCHHHEEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCC PGELPMDHDGLTELRFPFMRQMAWERKYEGYLLRFHIGASGVEDVLLSECGLKDIRFTTQ CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECC EGGSVGVHFKITAHPKDEIDHGKVATRLQQEIGITLTPPDDYVDPGLFGTPEPDYVPFEG CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCC SDLEQQEQD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA