| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027667
Identifier: 238027667
GI number: 238027667
Start: 2277941
End: 2278807
Strand: Reverse
Name: 238027667
Synonym: bglu_1g20880
Alternate gene names: NA
Gene position: 2278807-2277941 (Counterclockwise)
Preceding gene: 238027668
Following gene: 238027666
Centisome position: 58.33
GC content: 61.59
Gene sequence:
>867_bases ATGAGCGCCTATTACAACGAGATTGACCCGTATGCGGCGCAGTGGCTTCGCAACCTGATCGCCGCCGGCCACATCGCGCC TGGCGACGTCGACGAACGGAGTATCGAGGATGTCCGACCTGACGACCTGCGCGGATACACGCAGTGCCATTTCTTCGCCG GCCTTGGCGGATGGTCAAGAGCCCTCCGCCTCGCAGGCTGGCCCGATGACAGACCTGTTTGGACCGGTTCCTGTCCTTGC CAACCTTTCTCCGTCGCAGGCAAGGGACTTGGGTTTGATGACCCGCGACACCTCTGGCCTCATTGGTACTGGCTCATCAA ACAGCGACGACCTGCAACGATCTTTGGAGAGCAGGTTGCGGCAGCGACTGACTGGCTCGGTCTCGTGCGAAATAACCTGG AAGCCCTGGAATACGCCGTGGGGGCAATGCCTATCGAAGCCGCGAGCGCTGGTGCGGAACACTTTCGAGATCGTTATTGG TTTGTGGCCGACGGCGCAGTGCCGCCAGAAGGGCGGGGGCGACTACAAGGATCCATCGAAAGCTCTAGCGCGAATGTCGA GCGGTCACCAAGTGAATCTTTCGGACGTCGTGATCGCGCTCTGGTCAACGATCCGGGCATCGGATGGGGCGAAGGGTGGA CCGAACATGAGTTTCGGAGCCGGGGGTTCTCCGCTGCCGTCGCAAGTATCGACGGTTGCCAGTACGTCGAATGCCCCGAT GGAAAGTGGCGGCGGCTCCCTCCACCCCGAGTTCGCTGGCTGGGAAATGGGATACCCGCCCGAGTGGCTAAGCTGCGCGC CCTCGGAAACGCGATCGACCCGCGCCCGGCGGCCGCATTCATTGAAACCTGCATCGAACTGATCTGA
Upstream 100 bases:
>100_bases TCCGAAACGGCAGACACTGGATCGGCTGCGAGCTCGATCCGGATTGCCGCGATATGCAGGCGCAGCGGCTGCAGCAAAGC CCGCTGATCTTGGAAACGAT
Downstream 100 bases:
>100_bases GGACACCATGACGAACAACACCACCGCAGCCGCGCTGACGGACGAGCAGCGTGCAGCAATCAACATGGCAATCAGCGTGC TGACGCCTCTCGCGATGGAC
Product: methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Phage Methyltransferase; Cytosine-Specific Methyltransferase; Site-Specific DNA-Methyltransferase; Cytosine-Specific Methyltransferase Protein; Phage Methyltransferase Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSAYYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVRPDDLRGYTQCHFFAGLGGWSRALRLAGWPDDRPVWTGSCPC QPFSVAGKGLGFDDPRHLWPHWYWLIKQRRPATIFGEQVAAATDWLGLVRNNLEALEYAVGAMPIEAASAGAEHFRDRYW FVADGAVPPEGRGRLQGSIESSSANVERSPSESFGRRDRALVNDPGIGWGEGWTEHEFRSRGFSAAVASIDGCQYVECPD GKWRRLPPPRVRWLGNGIPARVAKLRALGNAIDPRPAAAFIETCIELI
Sequences:
>Translated_288_residues MSAYYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVRPDDLRGYTQCHFFAGLGGWSRALRLAGWPDDRPVWTGSCPC QPFSVAGKGLGFDDPRHLWPHWYWLIKQRRPATIFGEQVAAATDWLGLVRNNLEALEYAVGAMPIEAASAGAEHFRDRYW FVADGAVPPEGRGRLQGSIESSSANVERSPSESFGRRDRALVNDPGIGWGEGWTEHEFRSRGFSAAVASIDGCQYVECPD GKWRRLPPPRVRWLGNGIPARVAKLRALGNAIDPRPAAAFIETCIELI >Mature_287_residues SAYYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVRPDDLRGYTQCHFFAGLGGWSRALRLAGWPDDRPVWTGSCPCQ PFSVAGKGLGFDDPRHLWPHWYWLIKQRRPATIFGEQVAAATDWLGLVRNNLEALEYAVGAMPIEAASAGAEHFRDRYWF VADGAVPPEGRGRLQGSIESSSANVERSPSESFGRRDRALVNDPGIGWGEGWTEHEFRSRGFSAAVASIDGCQYVECPDG KWRRLPPPRVRWLGNGIPARVAKLRALGNAIDPRPAAAFIETCIELI
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31942; Mature: 31811
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVRPDDLRGYTQCHFFAGLGGWSR CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHCCHHHEEHHHCCCHHHH ALRLAGWPDDRPVWTGSCPCQPFSVAGKGLGFDDPRHLWPHWYWLIKQRRPATIFGEQVA HHHHCCCCCCCCEECCCCCCCCHHHCCCCCCCCCCHHHCHHHHHHHHCCCCCHHHHHHHH AATDWLGLVRNNLEALEYAVGAMPIEAASAGAEHFRDRYWFVADGAVPPEGRGRLQGSIE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCEEEEECCCCCCCCCCCEECCCC SSSANVERSPSESFGRRDRALVNDPGIGWGEGWTEHEFRSRGFSAAVASIDGCQYVECPD CCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCEEEECCC GKWRRLPPPRVRWLGNGIPARVAKLRALGNAIDPRPAAAFIETCIELI CCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure SAYYNEIDPYAAQWLRNLIAAGHIAPGDVDERSIEDVRPDDLRGYTQCHFFAGLGGWSR CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHCCHHHEEHHHCCCHHHH ALRLAGWPDDRPVWTGSCPCQPFSVAGKGLGFDDPRHLWPHWYWLIKQRRPATIFGEQVA HHHHCCCCCCCCEECCCCCCCCHHHCCCCCCCCCCHHHCHHHHHHHHCCCCCHHHHHHHH AATDWLGLVRNNLEALEYAVGAMPIEAASAGAEHFRDRYWFVADGAVPPEGRGRLQGSIE HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCEEEEECCCCCCCCCCCEECCCC SSSANVERSPSESFGRRDRALVNDPGIGWGEGWTEHEFRSRGFSAAVASIDGCQYVECPD CCCCCCCCCCHHHHCCCCCCEECCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCEEEECCC GKWRRLPPPRVRWLGNGIPARVAKLRALGNAIDPRPAAAFIETCIELI CCCCCCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA