| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027662
Identifier: 238027662
GI number: 238027662
Start: 2272423
End: 2273529
Strand: Reverse
Name: 238027662
Synonym: bglu_1g20830
Alternate gene names: NA
Gene position: 2273529-2272423 (Counterclockwise)
Preceding gene: 238027663
Following gene: 238027658
Centisome position: 58.2
GC content: 62.78
Gene sequence:
>1107_bases ATGATCGGGCGACGGAAGAAGGCGTCACCGCTGCCCGCGCGCGTCTACGAGAAGCACGGTTCGTGGTACTTCGTCGATAT GCGCCGGAAGTGGCACCGCCTTTGCAGTACGACCGATGGGCTCACGCGCCTCTATGAGCAACTCGCAAAGTTCAACCGCG AGGCGGATGAACGAGGTATTGCCGACACGATGCCTGCGCTCATCGACGACTGGCTGCTGGTAAAGCTCCCGAAGTATGCG CTGAAGACGCGCGAGGAATACCGGCGCATGGCGACATTCGTCAAATCGGAGTTCGGGCCGCAGTGGACAGTCGAGGACGT GCGCCCGGCCGACATCGCCCGGTTCCTCGACAAGCACTTCTCGACGAAACCGAACACCAGCAACAAATACAAGGCGCTCC TGTCGCTGATCTTCGCGCACGCCGTGCGCAAGGGGCTGCGCGATCGCAATCCGGCGCGCGAGGTCGCCGGCGCCGAGGAG AAGGCGCGCGACCGCTACATCACGGACATGGAGCTGGAGGCTGTCCGCGCTGCCGCGCTCGTTGGGTTGGACGGACGCCC GACCGCATCCGGAACGACGATCGTCTGCCTTATCGACCTGGCCTATCAGACCGCACAACGCATCGGCGATCTGCTTGCGC TGAACTGGCAAGATGTCAGCAACGACGGACTCTTCTTCCATCCCTCGAAAACGGTAAACAGCAGTGGCGTGCGCCTCCTG ATTCAATTGACGCCGGACTTGCGCGCCACGCTCGACGCGGCGAAGGCCGGCAAGGTGAAAGCAATCGGACCGATCATCTG CACGCAGGACGGCGCGCGCTATACCTACAGCGGCGCACAGACAGCATGGAAACGGGCGATTAAGCGCGCGCGCAAGTCCT ATGAGGGCGAGTGCGCTGCGAAGGGCACGGAGCCGGATCCTCGGTTTCTCGTCGGTATGCATTTCCATGACCTGAGAGCG AAAGCCCTTACCGACAAGCAGCGGCTCGAGGGTGCGAGAGCGGCGCAGGCACTCGCAGGACACACCACGGCGGAAATGAC CGCGCACTACACCAAAGCTCGCGAAGTGGAGCGTGTGACACCCGTTCCGATGCGTCGCACCAGTTGA
Upstream 100 bases:
>100_bases GCGCGTGTGGCGACACCATATCGCAGGCATCAGCATCCCGAAGAATCAGGAGCGAAGCCGGCGCCGTCCGCAACTCACTT CCGACATGAAGGCGGCGTAG
Downstream 100 bases:
>100_bases TTTTTGTCGTCTAACTTGGGGTGAAATCCCATCGCAAAGCCGCACCAGAAGCTGATTAAGAATTAGGCATCAAGTTAGAC AAAATGGCCTAAGTATCTGA
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase; Phage Integrase Family Site Specific Recombinase; Phage-Related Integrase; Hypothethical Protein Phage Integrase Domain; Integrase/Recombinase Protein; Integrase Prophage; Integrase Protein; Shufflon-Specific Recombinase; Integrase Partial Gene; Phage IntegrasePhage Integrase N-Terminal SAM-Like
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGIADTMPALIDDWLLVKLPKYA LKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHFSTKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEE KARDRYITDMELEAVRAAALVGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAAKGTEPDPRFLVGMHFHDLRA KALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVTPVPMRRTS
Sequences:
>Translated_368_residues MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGIADTMPALIDDWLLVKLPKYA LKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHFSTKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEE KARDRYITDMELEAVRAAALVGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAAKGTEPDPRFLVGMHFHDLRA KALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVTPVPMRRTS >Mature_368_residues MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGIADTMPALIDDWLLVKLPKYA LKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHFSTKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEE KARDRYITDMELEAVRAAALVGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAAKGTEPDPRFLVGMHFHDLRA KALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVTPVPMRRTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41432; Mature: 41432
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGI CCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCC ADTMPALIDDWLLVKLPKYALKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC STKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEEKARDRYITDMELEAVRAAAL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH VGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCEEE IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAA EEECCCHHHHHHHHHCCCEEECCCEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC KGTEPDPRFLVGMHFHDLRAKALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVT CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PVPMRRTS CCCCCCCC >Mature Secondary Structure MIGRRKKASPLPARVYEKHGSWYFVDMRRKWHRLCSTTDGLTRLYEQLAKFNREADERGI CCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCC ADTMPALIDDWLLVKLPKYALKTREEYRRMATFVKSEFGPQWTVEDVRPADIARFLDKHF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC STKPNTSNKYKALLSLIFAHAVRKGLRDRNPAREVAGAEEKARDRYITDMELEAVRAAAL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH VGLDGRPTASGTTIVCLIDLAYQTAQRIGDLLALNWQDVSNDGLFFHPSKTVNSSGVRLL CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCCCCCCEEE IQLTPDLRATLDAAKAGKVKAIGPIICTQDGARYTYSGAQTAWKRAIKRARKSYEGECAA EEECCCHHHHHHHHHCCCEEECCCEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC KGTEPDPRFLVGMHFHDLRAKALTDKQRLEGARAAQALAGHTTAEMTAHYTKAREVERVT CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC PVPMRRTS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA