| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027658
Identifier: 238027658
GI number: 238027658
Start: 2269559
End: 2270134
Strand: Reverse
Name: 238027658
Synonym: bglu_1g20790
Alternate gene names: NA
Gene position: 2270134-2269559 (Counterclockwise)
Preceding gene: 238027662
Following gene: 238027644
Centisome position: 58.11
GC content: 60.42
Gene sequence:
>576_bases ATGGGTCGCTACTCCGGTCTGGCAATGTTCATAGGGGCGTTTGCAGCAGGGATACTCGTCACGGCAGTGTTGCGCTGGCC ACCTGCGCAAAGTTCGGACTGGGCGGCATGGGTTCAGGCGGTGGGCTCGATCGGCGCCATCGTCGCGGCGACTAAGATCG CGTCCCAACAGGCGGATCGCGACAGGAAGCTGCGTCGTGATGAACTGCATGAGCGAGTCCAATGCGTGGCGGTCCTCGTG TCGCAGTGCAGAGACGTCGTGCTCACGTTGGATGAACAGATTCAGCGGCTTCCTGCCACCAATGGCTTGAAGTGGCCGCA TCCCGACCAAGTAAATGCCGTGCGAGCCGCGATGAATATCGTGAGCCTGATTAGGCCAGAACAGGCGCCTACCCCTAATA CCGTGGGCGCGTTGCTGAGGGTCCAGACAGCCATCGCGGGATGCGCGGGAATTGTCCCGATGCCCAGTGCGGAATTTCAC GTTGGCTGGGGCGATAAGCTGAAAGAGCTGGCCAGGGAATTGGTTGGGGCCAGCGAAACTCTGGAAATCGAGGCGGCGGT GGTCGCAAATAGCTAA
Upstream 100 bases:
>100_bases GTCATACGGTTGCGGGGTCATCGGGCGGCGCGTCTGCGACTTGCGACCCTGCGATATCGCCCGTACCATCGGCGCAGAAA ACAATATCGGGAGTTCACGC
Downstream 100 bases:
>100_bases GCGCATTTCGTATCCTCGATCACGGGGAATTCGTCATGCGTGCGGCCGTCGAGCAGCCGGCCGGCAGCGCGCTTGCCGAC GCTCCAAACCGATTCGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MGRYSGLAMFIGAFAAGILVTAVLRWPPAQSSDWAAWVQAVGSIGAIVAATKIASQQADRDRKLRRDELHERVQCVAVLV SQCRDVVLTLDEQIQRLPATNGLKWPHPDQVNAVRAAMNIVSLIRPEQAPTPNTVGALLRVQTAIAGCAGIVPMPSAEFH VGWGDKLKELARELVGASETLEIEAAVVANS
Sequences:
>Translated_191_residues MGRYSGLAMFIGAFAAGILVTAVLRWPPAQSSDWAAWVQAVGSIGAIVAATKIASQQADRDRKLRRDELHERVQCVAVLV SQCRDVVLTLDEQIQRLPATNGLKWPHPDQVNAVRAAMNIVSLIRPEQAPTPNTVGALLRVQTAIAGCAGIVPMPSAEFH VGWGDKLKELARELVGASETLEIEAAVVANS >Mature_190_residues GRYSGLAMFIGAFAAGILVTAVLRWPPAQSSDWAAWVQAVGSIGAIVAATKIASQQADRDRKLRRDELHERVQCVAVLVS QCRDVVLTLDEQIQRLPATNGLKWPHPDQVNAVRAAMNIVSLIRPEQAPTPNTVGALLRVQTAIAGCAGIVPMPSAEFHV GWGDKLKELARELVGASETLEIEAAVVANS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20438; Mature: 20307
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYSGLAMFIGAFAAGILVTAVLRWPPAQSSDWAAWVQAVGSIGAIVAATKIASQQADR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRKLRRDELHERVQCVAVLVSQCRDVVLTLDEQIQRLPATNGLKWPHPDQVNAVRAAMNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH VSLIRPEQAPTPNTVGALLRVQTAIAGCAGIVPMPSAEFHVGWGDKLKELARELVGASET HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCCC LEIEAAVVANS EEEEEEEEECC >Mature Secondary Structure GRYSGLAMFIGAFAAGILVTAVLRWPPAQSSDWAAWVQAVGSIGAIVAATKIASQQADR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRKLRRDELHERVQCVAVLVSQCRDVVLTLDEQIQRLPATNGLKWPHPDQVNAVRAAMNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH VSLIRPEQAPTPNTVGALLRVQTAIAGCAGIVPMPSAEFHVGWGDKLKELARELVGASET HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHCCCCC LEIEAAVVANS EEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA