| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027620
Identifier: 238027620
GI number: 238027620
Start: 2232208
End: 2233050
Strand: Reverse
Name: 238027620
Synonym: bglu_1g20410
Alternate gene names: NA
Gene position: 2233050-2232208 (Counterclockwise)
Preceding gene: 238027621
Following gene: 238027619
Centisome position: 57.16
GC content: 67.5
Gene sequence:
>843_bases ATGGCAGACGTGCAGGACGTGCTCGACACCGTGGCCGCGCAGGTCGCCGGGTTCGTGTACCCGAACGGCACCGGGCAACC CTCGGTGTCAGGGAAGGCCATCAACGTCTTCCCGGGCTGGCCGATGCCGAACCAGATCGACGTCGACATGCCGACGGGGG TGGCCGACGTCAGCGTGTATGCGACGCCGACCGAGCGCAACACGACGCGGTACCAGCCCAAGCAGAAGGTCATGTCGATC GCGGCCGCGACAGTGACCCTCACGGCAGCCGGCGGCACGCTGACCGTCGGGGGCGTGATGCCGTCTCCCTTCACGCCGCA CAACGTTGCCGCGCTGATCAACGGCCAGGCGTTCATCTATCCGGTGCAGCCGACTGATTCGCTGACCTCGGTCGCGACCG GGCTCGCCAACCTGATCGCCTCCCAGTACCCGGGAACGACGAACAGCGGCCCGGTGATCACGCTGGCCGCCGGCGTTGAG GCCGCGGTGGCGCGCGTGGGCACGACCGGCACCGTCACCACCGAGTGGGAGCGGCAGGCGCAGTTGTTCCAGATCACGGT GTGGGCGCCGGACCCGGCGACGCGCAAGGCGATCGGCGCCGCCATCAAAGAAGCGCTCGCGCCGATCACGTTCATCACCA TGCCTGACGGCTACGGCGCGCGGATTCGCTATGTCCGCAACGTGCTGTCCGACGTCGCTGAGAAGGTGCACGTCTACCGG CGCGATCTGTACTACGAGATCGAGTACGCGACGACGGCAACGGAGCAGGTGGCGACGGTGGTGGCCACGAAAGTCGAGGT CGAAACCCAGGCCGGCACGCCGGTCTTCACACGCACTTATTAG
Upstream 100 bases:
>100_bases CGACATCGTCACGGACGACGCCGGCCAGCGCTACCAGGTCTGGGCGCCGTACGTGAATTCGCTGGGACCGAACCTGCTCG TGGAGCGGCTGGAGGCGTAA
Downstream 100 bases:
>100_bases GAGCCAGCATGGCAAAGAATGATCAGACGGAAGGCGAGGCTGTTGAGTCCGCCGAAGGACAACCCGACGTCAACAACAAG AAGCCCCTCGCGGATCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MADVQDVLDTVAAQVAGFVYPNGTGQPSVSGKAINVFPGWPMPNQIDVDMPTGVADVSVYATPTERNTTRYQPKQKVMSI AAATVTLTAAGGTLTVGGVMPSPFTPHNVAALINGQAFIYPVQPTDSLTSVATGLANLIASQYPGTTNSGPVITLAAGVE AAVARVGTTGTVTTEWERQAQLFQITVWAPDPATRKAIGAAIKEALAPITFITMPDGYGARIRYVRNVLSDVAEKVHVYR RDLYYEIEYATTATEQVATVVATKVEVETQAGTPVFTRTY
Sequences:
>Translated_280_residues MADVQDVLDTVAAQVAGFVYPNGTGQPSVSGKAINVFPGWPMPNQIDVDMPTGVADVSVYATPTERNTTRYQPKQKVMSI AAATVTLTAAGGTLTVGGVMPSPFTPHNVAALINGQAFIYPVQPTDSLTSVATGLANLIASQYPGTTNSGPVITLAAGVE AAVARVGTTGTVTTEWERQAQLFQITVWAPDPATRKAIGAAIKEALAPITFITMPDGYGARIRYVRNVLSDVAEKVHVYR RDLYYEIEYATTATEQVATVVATKVEVETQAGTPVFTRTY >Mature_279_residues ADVQDVLDTVAAQVAGFVYPNGTGQPSVSGKAINVFPGWPMPNQIDVDMPTGVADVSVYATPTERNTTRYQPKQKVMSIA AATVTLTAAGGTLTVGGVMPSPFTPHNVAALINGQAFIYPVQPTDSLTSVATGLANLIASQYPGTTNSGPVITLAAGVEA AVARVGTTGTVTTEWERQAQLFQITVWAPDPATRKAIGAAIKEALAPITFITMPDGYGARIRYVRNVLSDVAEKVHVYRR DLYYEIEYATTATEQVATVVATKVEVETQAGTPVFTRTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29614; Mature: 29483
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVQDVLDTVAAQVAGFVYPNGTGQPSVSGKAINVFPGWPMPNQIDVDMPTGVADVSVY CCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCEEEEEE ATPTERNTTRYQPKQKVMSIAAATVTLTAAGGTLTVGGVMPSPFTPHNVAALINGQAFIY ECCCCCCCCCCCHHHHHHHHHEEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCEEEE PVQPTDSLTSVATGLANLIASQYPGTTNSGPVITLAAGVEAAVARVGTTGTVTTEWERQA ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEEECCCCCC QLFQITVWAPDPATRKAIGAAIKEALAPITFITMPDGYGARIRYVRNVLSDVAEKVHVYR EEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RDLYYEIEYATTATEQVATVVATKVEVETQAGTPVFTRTY HHEEEEEEECCCHHHHHHHHHHEEEEEEECCCCEEEEECC >Mature Secondary Structure ADVQDVLDTVAAQVAGFVYPNGTGQPSVSGKAINVFPGWPMPNQIDVDMPTGVADVSVY CCHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCEEEEEE ATPTERNTTRYQPKQKVMSIAAATVTLTAAGGTLTVGGVMPSPFTPHNVAALINGQAFIY ECCCCCCCCCCCHHHHHHHHHEEEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCEEEE PVQPTDSLTSVATGLANLIASQYPGTTNSGPVITLAAGVEAAVARVGTTGTVTTEWERQA ECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEEECCCCCC QLFQITVWAPDPATRKAIGAAIKEALAPITFITMPDGYGARIRYVRNVLSDVAEKVHVYR EEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RDLYYEIEYATTATEQVATVVATKVEVETQAGTPVFTRTY HHEEEEEEECCCHHHHHHHHHHEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA