| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027619
Identifier: 238027619
GI number: 238027619
Start: 2229922
End: 2231922
Strand: Reverse
Name: 238027619
Synonym: bglu_1g20400
Alternate gene names: NA
Gene position: 2231922-2229922 (Counterclockwise)
Preceding gene: 238027620
Following gene: 238027618
Centisome position: 57.13
GC content: 68.97
Gene sequence:
>2001_bases ATGGGCACGATGATTTACCAGTATGGCCAGCTCAACACCGCTGGCGCGATGGCGCCGGGCGCCTACGTCCAGATCGTCAA GCCGCCGCCGGTGGTTGCCGGCGTCGCGACGAACGGTTACGGCCTGGTCGGCGTGGCCTCGTGGGGCCCCGTGAACAGCC CGGTGGTGACCGGCTCGCCGCAAGCGAACCAGTCGAACTGGGGCGCCGTCACGAACCGGCAGCGGGATCTCGCGACGGCG ATCGCCATCGCGTTCGCGATCGGCCAGTACAACAACGTCGCGGTGCGTGTCACGGACGGCACCGACACCGCGGCGACGGG CACGCTGAAGGATGCGTCCAACGCGGTGGGAGCGACCCTGACGGGCTACTACACGGGCTCGCTCGGCAACAGCCTGGTGG CGACCCCCTCGACCGGGACCAAGCCGAACAGCTACAAGGTGACGCTGGCGCTGCCCGGCTTCCAGCCGGAGATCTTCGAC AACATCACGCAGGGCGTCAGCGGCGCGACCGTCACGCCCGGCACCGGCTTCACGTCGGTGCCGAACCTGGCGATCTCGGC GCCGCAGGCGGCTGGCGGCGTGCAGGCCGCTGGCAACGCATCGCTGAAGGTTGTGTCGGCGAACGTGTCGGGCGGCGGCG CGAATGGTGGGAGCGGGTTCGTCACCGGCGATACGGTGACGCTGGCAAACGGCGTGGTGCTCGGCGTGACGGCCTCGTCC GGCGCCATCACGGCCCTGTCCGTGACGAACGGCGGCACGCTGACGGGCGGCTCGGTGCCGACCAATCCGTCCGCGCCGCA GTCGACGTCTGGAGCCGGCACCGGCGCGCTGATCAACCTCGTCTGGGGCCTCGGTCCCGTGTCGATCACGAACCCGGGCA ACGGCTACACGAGCGCCACGGCGACCCTCTCAGGCGGCGGCGCGGGGACGGGCGGCGCAGTCACGCTCGCCACCAGCATC TGGTTGAACCTGGTCAACGCGATCAACCAGGGCCAGTCGGGGGTGCGCGGGCCGTCGCAGCTGGTGGTGGCCACCATCGG CACGTCGGCGGCCGCGCCGGCGCTGACCGCGGTGACGCTAAGCGGTGGCACGGACGGCGCGGCTGGCGTGACGGACGCGA CGCTCGTGGGCACCAACACGACGCCGCCGACCGGCATGTACGCGCTGCAGAGCGCCGGCGTGCAGACCATGAACCTCGTG GACCACTCGACCTCGAGCCAGTGGAGCACGATGGCGGCCTTCGCCCAGCAGTTCGGGTTGTTCGGTGCGGCGCAAGGCCA ACCGGGGCAGTCCATCGCGACGGTCTCGACCAACCTGAACACCGCCGGCGTCGACACCTACGGCCTGAAGTGCCTGGTCG GCGACTGGGTGTACTGGCAGGACACGTTGAACAACGTGCAGCGGCTGGTCGGCCCGGCGACGATCTGGGGGCCGATGCGC GCGAACCTGGCGCCGAACCAGTCGACGCTGAACAAGCCGGTTCTCGGCATCGTGGGCACGCAGCGCTCGGTGCAGGAGGT CCCGTACTCCGGTCCGGAAACCCTCTCGGCGGTGCAGGCCCGGCTCGACTTCCTGGCCAACCCGGCGCCGGGCGGCAACT ACTTCGCCTTCCAGACGGACCGCAACGTGTCGAGCGACGCCGCGACGAACAGCGAGGCGTACACCACGATGACGAACTTC CTGGCGCTGACGCTGGCGGCGAATTACGGATTCGTGGTGGGCAACCCGCAGACGGACAACCTGCGCACGGAGGTGAGGGA TTCGATCACCTCGTTCCTGACGAACCTGTGGCTGGTAAGCCAGTACATCGGCGACGTGAACAACCCGCAGGCGGTGCCGT TCAAGGTCACGCTGGATGCGTCGAACAACCCGGATGCGCAGGTCGCGATCGGCCTGATGCAGTGCCTGGTGGTGGTCAAG TTCCAGTCGATCGTTCGGGAGTTCCTGATCTCGCTACAAGGCGGCTCGACGGTGCAGGTGACCGTCAGCAACGGCTCCTG A
Upstream 100 bases:
>100_bases GAGAACGCCAACCACTGTCGCAAGGTAATCCCGCAGTAATCCACCTCACACCGCCAAACTGGCCGCCTTTCGGCGGCTTT TTGCATTTGGGAGCCGCTAG
Downstream 100 bases:
>100_bases GTTCGACCGGCCGGCGAATGCCGCTGGCCGGTCGTCGTTCGGTCCATTTCTTCTGTCCGGCCACGCGCCGGCTTTTTCAC ATCAGGAGCCGCAAATGGCT
Product: phage tail sheath protein
Products: NA
Alternate protein names: Phage-Related Protein
Number of amino acids: Translated: 666; Mature: 665
Protein sequence:
>666_residues MGTMIYQYGQLNTAGAMAPGAYVQIVKPPPVVAGVATNGYGLVGVASWGPVNSPVVTGSPQANQSNWGAVTNRQRDLATA IAIAFAIGQYNNVAVRVTDGTDTAATGTLKDASNAVGATLTGYYTGSLGNSLVATPSTGTKPNSYKVTLALPGFQPEIFD NITQGVSGATVTPGTGFTSVPNLAISAPQAAGGVQAAGNASLKVVSANVSGGGANGGSGFVTGDTVTLANGVVLGVTASS GAITALSVTNGGTLTGGSVPTNPSAPQSTSGAGTGALINLVWGLGPVSITNPGNGYTSATATLSGGGAGTGGAVTLATSI WLNLVNAINQGQSGVRGPSQLVVATIGTSAAAPALTAVTLSGGTDGAAGVTDATLVGTNTTPPTGMYALQSAGVQTMNLV DHSTSSQWSTMAAFAQQFGLFGAAQGQPGQSIATVSTNLNTAGVDTYGLKCLVGDWVYWQDTLNNVQRLVGPATIWGPMR ANLAPNQSTLNKPVLGIVGTQRSVQEVPYSGPETLSAVQARLDFLANPAPGGNYFAFQTDRNVSSDAATNSEAYTTMTNF LALTLAANYGFVVGNPQTDNLRTEVRDSITSFLTNLWLVSQYIGDVNNPQAVPFKVTLDASNNPDAQVAIGLMQCLVVVK FQSIVREFLISLQGGSTVQVTVSNGS
Sequences:
>Translated_666_residues MGTMIYQYGQLNTAGAMAPGAYVQIVKPPPVVAGVATNGYGLVGVASWGPVNSPVVTGSPQANQSNWGAVTNRQRDLATA IAIAFAIGQYNNVAVRVTDGTDTAATGTLKDASNAVGATLTGYYTGSLGNSLVATPSTGTKPNSYKVTLALPGFQPEIFD NITQGVSGATVTPGTGFTSVPNLAISAPQAAGGVQAAGNASLKVVSANVSGGGANGGSGFVTGDTVTLANGVVLGVTASS GAITALSVTNGGTLTGGSVPTNPSAPQSTSGAGTGALINLVWGLGPVSITNPGNGYTSATATLSGGGAGTGGAVTLATSI WLNLVNAINQGQSGVRGPSQLVVATIGTSAAAPALTAVTLSGGTDGAAGVTDATLVGTNTTPPTGMYALQSAGVQTMNLV DHSTSSQWSTMAAFAQQFGLFGAAQGQPGQSIATVSTNLNTAGVDTYGLKCLVGDWVYWQDTLNNVQRLVGPATIWGPMR ANLAPNQSTLNKPVLGIVGTQRSVQEVPYSGPETLSAVQARLDFLANPAPGGNYFAFQTDRNVSSDAATNSEAYTTMTNF LALTLAANYGFVVGNPQTDNLRTEVRDSITSFLTNLWLVSQYIGDVNNPQAVPFKVTLDASNNPDAQVAIGLMQCLVVVK FQSIVREFLISLQGGSTVQVTVSNGS >Mature_665_residues GTMIYQYGQLNTAGAMAPGAYVQIVKPPPVVAGVATNGYGLVGVASWGPVNSPVVTGSPQANQSNWGAVTNRQRDLATAI AIAFAIGQYNNVAVRVTDGTDTAATGTLKDASNAVGATLTGYYTGSLGNSLVATPSTGTKPNSYKVTLALPGFQPEIFDN ITQGVSGATVTPGTGFTSVPNLAISAPQAAGGVQAAGNASLKVVSANVSGGGANGGSGFVTGDTVTLANGVVLGVTASSG AITALSVTNGGTLTGGSVPTNPSAPQSTSGAGTGALINLVWGLGPVSITNPGNGYTSATATLSGGGAGTGGAVTLATSIW LNLVNAINQGQSGVRGPSQLVVATIGTSAAAPALTAVTLSGGTDGAAGVTDATLVGTNTTPPTGMYALQSAGVQTMNLVD HSTSSQWSTMAAFAQQFGLFGAAQGQPGQSIATVSTNLNTAGVDTYGLKCLVGDWVYWQDTLNNVQRLVGPATIWGPMRA NLAPNQSTLNKPVLGIVGTQRSVQEVPYSGPETLSAVQARLDFLANPAPGGNYFAFQTDRNVSSDAATNSEAYTTMTNFL ALTLAANYGFVVGNPQTDNLRTEVRDSITSFLTNLWLVSQYIGDVNNPQAVPFKVTLDASNNPDAQVAIGLMQCLVVVKF QSIVREFLISLQGGSTVQVTVSNGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66905; Mature: 66774
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTMIYQYGQLNTAGAMAPGAYVQIVKPPPVVAGVATNGYGLVGVASWGPVNSPVVTGSP CCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEECCC QANQSNWGAVTNRQRDLATAIAIAFAIGQYNNVAVRVTDGTDTAATGTLKDASNAVGATL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEE TGYYTGSLGNSLVATPSTGTKPNSYKVTLALPGFQPEIFDNITQGVSGATVTPGTGFTSV EEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCCC PNLAISAPQAAGGVQAAGNASLKVVSANVSGGGANGGSGFVTGDTVTLANGVVLGVTASS CCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCEEEEECCEEEEEEECC GAITALSVTNGGTLTGGSVPTNPSAPQSTSGAGTGALINLVWGLGPVSITNPGNGYTSAT CCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEE ATLSGGGAGTGGAVTLATSIWLNLVNAINQGQSGVRGPSQLVVATIGTSAAAPALTAVTL EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEE SGGTDGAAGVTDATLVGTNTTPPTGMYALQSAGVQTMNLVDHSTSSQWSTMAAFAQQFGL CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCC FGAAQGQPGQSIATVSTNLNTAGVDTYGLKCLVGDWVYWQDTLNNVQRLVGPATIWGPMR EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHCCHHEECCCC ANLAPNQSTLNKPVLGIVGTQRSVQEVPYSGPETLSAVQARLDFLANPAPGGNYFAFQTD CCCCCCHHHCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC RNVSSDAATNSEAYTTMTNFLALTLAANYGFVVGNPQTDNLRTEVRDSITSFLTNLWLVS CCCCCCCCCCCCHHHHHHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH QYIGDVNNPQAVPFKVTLDASNNPDAQVAIGLMQCLVVVKFQSIVREFLISLQGGSTVQV HHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE TVSNGS EECCCC >Mature Secondary Structure GTMIYQYGQLNTAGAMAPGAYVQIVKPPPVVAGVATNGYGLVGVASWGPVNSPVVTGSP CCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEECCC QANQSNWGAVTNRQRDLATAIAIAFAIGQYNNVAVRVTDGTDTAATGTLKDASNAVGATL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEE TGYYTGSLGNSLVATPSTGTKPNSYKVTLALPGFQPEIFDNITQGVSGATVTPGTGFTSV EEEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCCC PNLAISAPQAAGGVQAAGNASLKVVSANVSGGGANGGSGFVTGDTVTLANGVVLGVTASS CCCEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCEEEEECCEEEEEEECC GAITALSVTNGGTLTGGSVPTNPSAPQSTSGAGTGALINLVWGLGPVSITNPGNGYTSAT CCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEE ATLSGGGAGTGGAVTLATSIWLNLVNAINQGQSGVRGPSQLVVATIGTSAAAPALTAVTL EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEEEEEEE SGGTDGAAGVTDATLVGTNTTPPTGMYALQSAGVQTMNLVDHSTSSQWSTMAAFAQQFGL CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCC FGAAQGQPGQSIATVSTNLNTAGVDTYGLKCLVGDWVYWQDTLNNVQRLVGPATIWGPMR EECCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHHHCCHHEECCCC ANLAPNQSTLNKPVLGIVGTQRSVQEVPYSGPETLSAVQARLDFLANPAPGGNYFAFQTD CCCCCCHHHCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECC RNVSSDAATNSEAYTTMTNFLALTLAANYGFVVGNPQTDNLRTEVRDSITSFLTNLWLVS CCCCCCCCCCCCHHHHHHHHHEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH QYIGDVNNPQAVPFKVTLDASNNPDAQVAIGLMQCLVVVKFQSIVREFLISLQGGSTVQV HHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE TVSNGS EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA