| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027610
Identifier: 238027610
GI number: 238027610
Start: 2221807
End: 2222928
Strand: Reverse
Name: 238027610
Synonym: bglu_1g20310
Alternate gene names: NA
Gene position: 2222928-2221807 (Counterclockwise)
Preceding gene: 238027611
Following gene: 238027609
Centisome position: 56.9
GC content: 65.42
Gene sequence:
>1122_bases ATGGCAAATCTGTCTACCCAGTCGTTCGCGACGATCGTTCAGAACTTCGCCACCGCGGTTCAGGGGGCGGCGTCGCAGCT CATCGACTTCACCGTTGGCTCGGTGCTGCTCGCCATTGCGGAGGCCACCGGCGGTGTTGCGCTCTGGCTGCAAGGGCTGG TGCTCCAGGTGTTGGCGCTGACGCGGGCCTCGACGTCGACAGGCGCTGACCTGGATAGCTGGTTCGCGCAATTCGGCTTC GCGCGGTTGCCGGCGGACGCTGCAACGACGCAGGAGACGTTTTCTCGCTTCACGCCGACGAGTCAGGCGCTCGTGGAGGT TGGAGGTATCGTCCAGACCGCCGACGGCACGGTCCAGTTCGCTGTCGTGGCCGATACGACCAATCCGGCATACAGCGCGG CTCAAGGCGGCTACGTGATTCCGGCCGGCCAGGCGAGCGTGTCGGTGACGGTGCAATGCACGGTTGCAGGCACGATCGGG AACGTCTCCGCCGGGGCACTGAACACGCTGGGCACCGCGATTCCCGGCGTCGATTTCGTCTCAAACTCGTTGGCCGTCCA GAACGGCGTCGACGCCGAATCCGACGCTGCAGCGCGCGCTCGGTTCGTCTTGTGGGTGGCTGCGATCGGGGGCGCCACGC TGGCCGCAGTGAAGGCGGCTGCCAACAGCGTCGCGCTGAACGTCAAGAGCACGATCCTCGAGAACCAGCAGTACAACGGC CAGCCGCAGAACGGCTACTTCACGGTCATCACGGACGACGGGACGGGAGATCCGCCGAGCAGCACGCTGGATGCTGTCGG TGCAGCGGTTGAAGTGGCGCGGCCGCTCTGTTCGACGTACAGCGTGCACGGTCCGCAGGATGTGACCGCCAACGTGACCA TGGCTATCACCACAACCGGCGTGACGCACGCCACCGCGGTCGAGCAGGTGACTGCTGCGCTCTCGTCCTACATCGAAGGC CTGGGCGACGGCGTCTCGCTTCCGTACACCATCCTCGCCTCGATTGCTTACGGCGTCGCTGGCGTCACGAATGTGACCGG GGTGCTGCTGAACGGCGGCACGAGCGACATCACGGTCACCAACACCCAGCGCGTCATGCCTGGAACCATCACGGTGAACT GA
Upstream 100 bases:
>100_bases GACGCAGACGCAGAACGTCGTCAGCACGTCGATCTCCTATACCGACGCGAACACGGCGCAGACGCAACTGGTGTCGTTCG ATATCTCACAAGAGCCCTAA
Downstream 100 bases:
>100_bases ATGGCAACGGGAGATTCGACAGATATCTTGTCGCGGCTGAAGTCTTACATGCCGCGCGGGTGGTTCGGCGACTGGGCGGA AGCACCGATCATCAGCGCGG
Product: putative phage baseplate protein
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein; Phage Protein
Number of amino acids: Translated: 373; Mature: 372
Protein sequence:
>373_residues MANLSTQSFATIVQNFATAVQGAASQLIDFTVGSVLLAIAEATGGVALWLQGLVLQVLALTRASTSTGADLDSWFAQFGF ARLPADAATTQETFSRFTPTSQALVEVGGIVQTADGTVQFAVVADTTNPAYSAAQGGYVIPAGQASVSVTVQCTVAGTIG NVSAGALNTLGTAIPGVDFVSNSLAVQNGVDAESDAAARARFVLWVAAIGGATLAAVKAAANSVALNVKSTILENQQYNG QPQNGYFTVITDDGTGDPPSSTLDAVGAAVEVARPLCSTYSVHGPQDVTANVTMAITTTGVTHATAVEQVTAALSSYIEG LGDGVSLPYTILASIAYGVAGVTNVTGVLLNGGTSDITVTNTQRVMPGTITVN
Sequences:
>Translated_373_residues MANLSTQSFATIVQNFATAVQGAASQLIDFTVGSVLLAIAEATGGVALWLQGLVLQVLALTRASTSTGADLDSWFAQFGF ARLPADAATTQETFSRFTPTSQALVEVGGIVQTADGTVQFAVVADTTNPAYSAAQGGYVIPAGQASVSVTVQCTVAGTIG NVSAGALNTLGTAIPGVDFVSNSLAVQNGVDAESDAAARARFVLWVAAIGGATLAAVKAAANSVALNVKSTILENQQYNG QPQNGYFTVITDDGTGDPPSSTLDAVGAAVEVARPLCSTYSVHGPQDVTANVTMAITTTGVTHATAVEQVTAALSSYIEG LGDGVSLPYTILASIAYGVAGVTNVTGVLLNGGTSDITVTNTQRVMPGTITVN >Mature_372_residues ANLSTQSFATIVQNFATAVQGAASQLIDFTVGSVLLAIAEATGGVALWLQGLVLQVLALTRASTSTGADLDSWFAQFGFA RLPADAATTQETFSRFTPTSQALVEVGGIVQTADGTVQFAVVADTTNPAYSAAQGGYVIPAGQASVSVTVQCTVAGTIGN VSAGALNTLGTAIPGVDFVSNSLAVQNGVDAESDAAARARFVLWVAAIGGATLAAVKAAANSVALNVKSTILENQQYNGQ PQNGYFTVITDDGTGDPPSSTLDAVGAAVEVARPLCSTYSVHGPQDVTANVTMAITTTGVTHATAVEQVTAALSSYIEGL GDGVSLPYTILASIAYGVAGVTNVTGVLLNGGTSDITVTNTQRVMPGTITVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37516; Mature: 37385
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLSTQSFATIVQNFATAVQGAASQLIDFTVGSVLLAIAEATGGVALWLQGLVLQVLAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TRASTSTGADLDSWFAQFGFARLPADAATTQETFSRFTPTSQALVEVGGIVQTADGTVQF HHCCCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCEEEECCCEEEE AVVADTTNPAYSAAQGGYVIPAGQASVSVTVQCTVAGTIGNVSAGALNTLGTAIPGVDFV EEEEECCCCCCHHCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCHHHH SNSLAVQNGVDAESDAAARARFVLWVAAIGGATLAAVKAAANSVALNVKSTILENQQYNG CCCHHHCCCCCCCCCHHHHHHHHEEEEHHCCHHHHHHHHHHHHEEEEHHHHHHCCCCCCC QPQNGYFTVITDDGTGDPPSSTLDAVGAAVEVARPLCSTYSVHGPQDVTANVTMAITTTG CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECC VTHATAVEQVTAALSSYIEGLGDGVSLPYTILASIAYGVAGVTNVTGVLLNGGTSDITVT CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCEEEEECCCCCEEEE NTQRVMPGTITVN CCCEECCCEEEEC >Mature Secondary Structure ANLSTQSFATIVQNFATAVQGAASQLIDFTVGSVLLAIAEATGGVALWLQGLVLQVLAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TRASTSTGADLDSWFAQFGFARLPADAATTQETFSRFTPTSQALVEVGGIVQTADGTVQF HHCCCCCCCCHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCEEEECCCEEEE AVVADTTNPAYSAAQGGYVIPAGQASVSVTVQCTVAGTIGNVSAGALNTLGTAIPGVDFV EEEEECCCCCCHHCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHCCCHHHH SNSLAVQNGVDAESDAAARARFVLWVAAIGGATLAAVKAAANSVALNVKSTILENQQYNG CCCHHHCCCCCCCCCHHHHHHHHEEEEHHCCHHHHHHHHHHHHEEEEHHHHHHCCCCCCC QPQNGYFTVITDDGTGDPPSSTLDAVGAAVEVARPLCSTYSVHGPQDVTANVTMAITTTG CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECC VTHATAVEQVTAALSSYIEGLGDGVSLPYTILASIAYGVAGVTNVTGVLLNGGTSDITVT CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCEEEEECCCCCEEEE NTQRVMPGTITVN CCCEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA