| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027611
Identifier: 238027611
GI number: 238027611
Start: 2222929
End: 2223336
Strand: Reverse
Name: 238027611
Synonym: bglu_1g20320
Alternate gene names: NA
Gene position: 2223336-2222929 (Counterclockwise)
Preceding gene: 238027612
Following gene: 238027610
Centisome position: 56.91
GC content: 63.73
Gene sequence:
>408_bases ATGGTCGATCTCTACCACTACTACGGCACGGACCTCTCCGCGTCGCCGTCCGGCGATCTCGTGGTCGCCGATGGCCCGAC GACGGGCGTGCAGCGGGTCTATCGACGTCTGCTGACGAATCCAGCCCTCTCAGATGCGGCCGGAAATCCGATCGCCTCGG CCGACTACACGTGGCAGCCGCAGTACGGTGCCGGCGTGCCGAGGAAGATTGGCTCGCCTGGCAACGTCCCGGTGACGACG GCGCTGATCAAAGGGCAGATGCTGCTCGAGGCGGCTGTCGCTCGACAGCCTCAACCGCAGATCAGCCTGACGCAGACGCA GAACGTCGTCAGCACGTCGATCTCCTATACCGACGCGAACACGGCGCAGACGCAACTGGTGTCGTTCGATATCTCACAAG AGCCCTAA
Upstream 100 bases:
>100_bases ATTCGACCGGCTCGATCACGAACAACGGGAAGCACGTGGACAGCACGCACGTGCATTCGAATGGCAACGGCGGCGCGAAT ACAGGGACTCCGGTGAGCTG
Downstream 100 bases:
>100_bases ATGGCAAATCTGTCTACCCAGTCGTTCGCGACGATCGTTCAGAACTTCGCCACCGCGGTTCAGGGGGCGGCGTCGCAGCT CATCGACTTCACCGTTGGCT
Product: putative phage tail protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MVDLYHYYGTDLSASPSGDLVVADGPTTGVQRVYRRLLTNPALSDAAGNPIASADYTWQPQYGAGVPRKIGSPGNVPVTT ALIKGQMLLEAAVARQPQPQISLTQTQNVVSTSISYTDANTAQTQLVSFDISQEP
Sequences:
>Translated_135_residues MVDLYHYYGTDLSASPSGDLVVADGPTTGVQRVYRRLLTNPALSDAAGNPIASADYTWQPQYGAGVPRKIGSPGNVPVTT ALIKGQMLLEAAVARQPQPQISLTQTQNVVSTSISYTDANTAQTQLVSFDISQEP >Mature_135_residues MVDLYHYYGTDLSASPSGDLVVADGPTTGVQRVYRRLLTNPALSDAAGNPIASADYTWQPQYGAGVPRKIGSPGNVPVTT ALIKGQMLLEAAVARQPQPQISLTQTQNVVSTSISYTDANTAQTQLVSFDISQEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14324; Mature: 14324
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDLYHYYGTDLSASPSGDLVVADGPTTGVQRVYRRLLTNPALSDAAGNPIASADYTWQP CCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC QYGAGVPRKIGSPGNVPVTTALIKGQMLLEAAVARQPQPQISLTQTQNVVSTSISYTDAN CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHEEECCCCC TAQTQLVSFDISQEP CCEEEEEEEECCCCC >Mature Secondary Structure MVDLYHYYGTDLSASPSGDLVVADGPTTGVQRVYRRLLTNPALSDAAGNPIASADYTWQP CCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC QYGAGVPRKIGSPGNVPVTTALIKGQMLLEAAVARQPQPQISLTQTQNVVSTSISYTDAN CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHEEECCCCC TAQTQLVSFDISQEP CCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA