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The map label for this gene is rimP [H]

Identifier: 238027586

GI number: 238027586

Start: 2196935

End: 2197396

Strand: Reverse

Name: rimP [H]

Synonym: bglu_1g20040

Alternate gene names: 238027586

Gene position: 2197396-2196935 (Counterclockwise)

Preceding gene: 238027587

Following gene: 238027585

Centisome position: 56.25

GC content: 59.09

Gene sequence:

>462_bases
GTGCAACTGACGGAACTGATAGAAACCACGGTCACCGGGCTCGGCTACGAGCTGGTCGATCTCGAGCGCACCGGGCGCGG
CATGCTCTGCGTCTACATCGATCAGCCAGCGGGCATCTCGATCGACGACTGCGAAAAAGTCACGCGTCAGCTGCAGCACG
TATTGACGGTCGAAAACATCGATTACGAACGGCTCGAGGTGTCGTCCCCGGGCCTCGACCGACCGCTGAAGAAGCTGGCC
GACTTCGAACGGTTCGCCGGGAGCGAAATCTCCGTCACCCTGAAAAAGCCGCTGGAAGGCCGCAAGACCTACCGGGGCAT
CCTGCATGCGCCGAACGGCGAAACGATCGGTTTGGAATTCGAGATGAAGAAGGGCGAAGCGGCCATGCTGGATTTCACGC
TGGCCGATATCGACAAAGCCCGTCTGATTCCGCAAGTTGACTTTAGGAGCCGCAAACAATGA

Upstream 100 bases:

>100_bases
AAACGGTTGGGCATCTCGGGTAGCGCGCTTCCTGCGCCAGCAAAGGCGCGCGTCTGCGGGTGAATCGCGAACGGCGGGCG
CGAACATCCGAGAGGACACA

Downstream 100 bases:

>100_bases
GTCGCGAAGTGTTGATGCTGGTGGATGCGCTGGCGCGCGAGAAGAACGTCGACAAGGATGTCGTGCTGGGTGCGCTCGAA
GCGGCACTCGCGTCGGCCTC

Product: ribosome maturation protein RimP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETIGLEFEMKKGEAAMLDFTLADIDKARLIPQVDFRSRKQ

Sequences:

>Translated_153_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETIGLEFEMKKGEAAMLDFTLADIDKARLIPQVDFRSRKQ
>Mature_153_residues
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETIGLEFEMKKGEAAMLDFTLADIDKARLIPQVDFRSRKQ

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=149, Percent_Identity=40.2684563758389, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17256; Mature: 17256

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISIDDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETIGLEF
CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHCCEEECCCCCEEEEEE
EMKKGEAAMLDFTLADIDKARLIPQVDFRSRKQ
EECCCCEEEEEEEHHCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMLCVYIDQPAGISIDDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFERFAGSEISVTLKKPLEGRKTYRGILHAPNGETIGLEF
CCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHCCEEECCCCCEEEEEE
EMKKGEAAMLDFTLADIDKARLIPQVDFRSRKQ
EECCCCEEEEEEEHHCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA