Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
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Accession | NC_012724 |
Length | 3,906,507 |
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The map label for this gene is 238027564
Identifier: 238027564
GI number: 238027564
Start: 2168193
End: 2168663
Strand: Reverse
Name: 238027564
Synonym: bglu_1g19820
Alternate gene names: NA
Gene position: 2168663-2168193 (Counterclockwise)
Preceding gene: 238027565
Following gene: 238027563
Centisome position: 55.51
GC content: 67.09
Gene sequence:
>471_bases ATGAGGCCGCTACTTCACGCACCGCTGCGCCGCAGTCAGCGCGGCTCGATGTCGGTCGAATTCGCCCTGATCCTGCCGGC GTTCTTCATGGTGCTTTACGCGGTCATTACCTACGGGCTGATCTTCGCCGCGCAACAGAACCTGACGCTCGCCGCCACCG AGGGCGCGCGCGCCGCGCTGAACTACCAGATCAGCCCGACGCCGCAGGCGGCCCTGACCGCGCGCGCTGCGGCGGCCTGC ACGGCCGCGACCCACCTGACCGGCTGGCTGACCGGCGTGAGTTGCGCGTCGACGCCGGCCGGCACCTGCAGCTACGACTC GTCAATGTATTGCATCAAGGTCACGCTCACCTATCCCTACAGCAGCAGCCCGCTGATCGCCCCGCTGCCGCTTGTCGGCA TGCTGCTGCCGGTGCCGGATTCGCTGACGGGGACGGCCATGGTACAGATCAGTCCCGTCAACATCATCTAG
Upstream 100 bases:
>100_bases CATTGGCGCTCGGTGCGCGTCGCGGTTCGCCTTATGCGGCGTTTCTCGTCATAGCGGCGGCCGCGTGGTTGATATATCTG ATCGTTACGGGGAATTTGCG
Downstream 100 bases:
>100_bases GAGGCCCGGTTGGCGTCACGGCGCGCCGTGACCCGGCGGCGTGCGAACCAGCAGGGGCGGCGTCGGCAAAGGCATTGACA GCAGCGGCAGCGGGCGCAAC
Product: TadE-like protein
Products: NA
Alternate protein names: TadE-Like Protein; Tade-Like; Transmembrane Protein; Flp Pilus Assembly Protein TadG
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRPLLHAPLRRSQRGSMSVEFALILPAFFMVLYAVITYGLIFAAQQNLTLAATEGARAALNYQISPTPQAALTARAAAAC TAATHLTGWLTGVSCASTPAGTCSYDSSMYCIKVTLTYPYSSSPLIAPLPLVGMLLPVPDSLTGTAMVQISPVNII
Sequences:
>Translated_156_residues MRPLLHAPLRRSQRGSMSVEFALILPAFFMVLYAVITYGLIFAAQQNLTLAATEGARAALNYQISPTPQAALTARAAAAC TAATHLTGWLTGVSCASTPAGTCSYDSSMYCIKVTLTYPYSSSPLIAPLPLVGMLLPVPDSLTGTAMVQISPVNII >Mature_156_residues MRPLLHAPLRRSQRGSMSVEFALILPAFFMVLYAVITYGLIFAAQQNLTLAATEGARAALNYQISPTPQAALTARAAAAC TAATHLTGWLTGVSCASTPAGTCSYDSSMYCIKVTLTYPYSSSPLIAPLPLVGMLLPVPDSLTGTAMVQISPVNII
Specific function: Unknown
COG id: COG4961
COG function: function code U; Flp pilus assembly protein TadG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16408; Mature: 16408
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPLLHAPLRRSQRGSMSVEFALILPAFFMVLYAVITYGLIFAAQQNLTLAATEGARAAL CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEE NYQISPTPQAALTARAAAACTAATHLTGWLTGVSCASTPAGTCSYDSSMYCIKVTLTYPY EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCC SSSPLIAPLPLVGMLLPVPDSLTGTAMVQISPVNII CCCCCEECHHHHHHEECCCCCCCCEEEEEEECEECC >Mature Secondary Structure MRPLLHAPLRRSQRGSMSVEFALILPAFFMVLYAVITYGLIFAAQQNLTLAATEGARAAL CCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEE NYQISPTPQAALTARAAAACTAATHLTGWLTGVSCASTPAGTCSYDSSMYCIKVTLTYPY EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCC SSSPLIAPLPLVGMLLPVPDSLTGTAMVQISPVNII CCCCCEECHHHHHHEECCCCCCCCEEEEEEECEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA