Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027565

Identifier: 238027565

GI number: 238027565

Start: 2168660

End: 2169160

Strand: Reverse

Name: 238027565

Synonym: bglu_1g19830

Alternate gene names: NA

Gene position: 2169160-2168660 (Counterclockwise)

Preceding gene: 238027566

Following gene: 238027564

Centisome position: 55.53

GC content: 56.49

Gene sequence:

>501_bases
ATGATTCTGATTTTGAGCGTCGCGGTATTCCTGGCGTGGGTCACGATGGTTGCGGCTGGTGATATTCGTTATCGGCGTAT
TCCCAATTCTTTGGTAGTGGCCGGTTTGATCTGCGGAATGGTATCGACCATTAGCCGCTACAACCCGTTTGGCATAACAC
CGGTCGAGGCGGTAATCGGGGCCGTGATCGGATTCGTCGGATTGTTTCCGTTTTTCGCATGCCGCCTGATGGGGGCTGCA
GATGTGAAGGTATTTACTGTGCTCGGGTTGTGGTGCGGATTTCAGGGTTTGTTCTGGTGCTGGATTGCCGCGAGTCTGGC
GGCATTGATTCACGTGCTCGGCATGATGTACTGGACCCGTACGCCGATCGGGGCATTGTGGCAGCGCGGGTCGCCGACAT
TGGCGCTCGGTGCGCGTCGCGGTTCGCCTTATGCGGCGTTTCTCGTCATAGCGGCGGCCGCGTGGTTGATATATCTGATC
GTTACGGGGAATTTGCGATGA

Upstream 100 bases:

>100_bases
GCGGCTCGAGCAGCTAACCCGATCCTGCTGTTCCGCATGCGGATGCGCGGGTCGCCGGTTCGGCGCCCGCATTTGCCGTG
CCCGCCTTTCGAGAATCGGA

Downstream 100 bases:

>100_bases
GGCCGCTACTTCACGCACCGCTGCGCCGCAGTCAGCGCGGCTCGATGTCGGTCGAATTCGCCCTGATCCTGCCGGCGTTC
TTCATGGTGCTTTACGCGGT

Product: peptidase A24A, prepilin type IV

Products: NA

Alternate protein names: Prepilin Peptidase Transmembrane Protein CpaA Like; Type II Secretory Pathway Prepilin Signal Peptidase PulO

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MILILSVAVFLAWVTMVAAGDIRYRRIPNSLVVAGLICGMVSTISRYNPFGITPVEAVIGAVIGFVGLFPFFACRLMGAA
DVKVFTVLGLWCGFQGLFWCWIAASLAALIHVLGMMYWTRTPIGALWQRGSPTLALGARRGSPYAAFLVIAAAAWLIYLI
VTGNLR

Sequences:

>Translated_166_residues
MILILSVAVFLAWVTMVAAGDIRYRRIPNSLVVAGLICGMVSTISRYNPFGITPVEAVIGAVIGFVGLFPFFACRLMGAA
DVKVFTVLGLWCGFQGLFWCWIAASLAALIHVLGMMYWTRTPIGALWQRGSPTLALGARRGSPYAAFLVIAAAAWLIYLI
VTGNLR
>Mature_166_residues
MILILSVAVFLAWVTMVAAGDIRYRRIPNSLVVAGLICGMVSTISRYNPFGITPVEAVIGAVIGFVGLFPFFACRLMGAA
DVKVFTVLGLWCGFQGLFWCWIAASLAALIHVLGMMYWTRTPIGALWQRGSPTLALGARRGSPYAAFLVIAAAAWLIYLI
VTGNLR

Specific function: Unknown

COG id: COG4960

COG function: function code OU; Flp pilus assembly protein, protease CpaA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17943; Mature: 17943

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILILSVAVFLAWVTMVAAGDIRYRRIPNSLVVAGLICGMVSTISRYNPFGITPVEAVIG
CHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AVIGFVGLFPFFACRLMGAADVKVFTVLGLWCGFQGLFWCWIAASLAALIHVLGMMYWTR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPIGALWQRGSPTLALGARRGSPYAAFLVIAAAAWLIYLIVTGNLR
CCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILILSVAVFLAWVTMVAAGDIRYRRIPNSLVVAGLICGMVSTISRYNPFGITPVEAVIG
CHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
AVIGFVGLFPFFACRLMGAADVKVFTVLGLWCGFQGLFWCWIAASLAALIHVLGMMYWTR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPIGALWQRGSPTLALGARRGSPYAAFLVIAAAAWLIYLIVTGNLR
CCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA