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The map label for this gene is hofB [C]

Identifier: 238027560

GI number: 238027560

Start: 2162919

End: 2164265

Strand: Reverse

Name: hofB [C]

Synonym: bglu_1g19780

Alternate gene names: 238027560

Gene position: 2164265-2162919 (Counterclockwise)

Preceding gene: 238027561

Following gene: 238027559

Centisome position: 55.4

GC content: 67.11

Gene sequence:

>1347_bases
ATGGCACACGACGACATCCAATTCGCCGACGGCGCAGCGCCGTTCTCGCACTCGCAGCAGTTCCACGACATCAAGGACGC
TGCGCACGAGCATCTGCTGAACCGCATCGAGGAACTCGGCTCGGAGTTCGGGCGCTGGTCGCGGCAGGCGATCAACCAGT
TCGTCGATCTCGAGGTCGACAGCTTCGTGCGGCTGCGCCGGATTCCGCTCAACGAGAGCGAGGTGCGCGAGATCGCCGAG
GCGCTGACCAAGGAGCTGGCCGGCTTCGGGCCGATCGAGGACCTGCTCGGCGATCCGCTGGTGGAGGACATCCTGATCAA
CGGCTACAACGACATCTACGTGTCGCGCCGCGGGATCCTCGCCAAGCTGCCGATCCGCTTCACCGACAACGCGCACCTGC
TGCGCATCGTGCGGCGGATCCTGGCGCCGGTCGGGCGCCGGCTCGACGAATCGAACCCGATGGTCGACGCGCGGCTGCCA
GACGGCGGGCGCGTGAACGTGGTGATCGAGCCGCTCTCGCTCGACGGGCCGGTGGTGTCGATCCGCAAGTTCCGCAAGGA
TCCGCTGAAGCCGTCGGACCTGCTCGAGAACGGCACCTACAACGACGAGATCAACACGCTGCTGAAGGCCGCCGTCGCGG
CGCGCTGCAACATCCTGGTGTCGGGCGGCACGAGCTCGGGCAAGACCTCGCTGCTCAATGCGCTGGCGTTTCACGTGCCC
GAGAACGAGCGCGTGGTGACCATCGAGGACACCGCCGAGCTGTCGCTGAACCATCCGCACGTGGTGCGGCTCGAAAGCCG
CCCGGGCGGCTTCGACGGCACCGGCGTGGTGACCATTCGCGACCTGCTGCGCAACACGCTGCGGATGCGCCCGGACCGCA
TCATCGTCGGCGAAGTGCGCGGCGGCGAGGTGCTCGAGATGCTGCAGGCGATGAACACCGGCCACGACGGCTCGATGGGC
ACCATCCACGCGAGCTCGCCGCGCGAATGCCTGTATCGCCTGGAGATGCTGGCCGGCTTCGCCGGCTTCCAGGGTACCGA
ATCGAGCCTGCGCCGCCAGATCTCGAACGCGATCGACTTCATCGTGCAGATCGGACGGCTGTCCAACGGGCGCCGCCGGA
TCCTGTCGATCACCGAGGTGACCGGCATGTCCGACAACATCGTCGCGACCCAGGAGCTCTATCGCTACGACGCGCGCGTG
ACGCCCGAGGGCGAGGAGATCGATCACTGGGAAGCGCTCGGCATCCACCCGCATTCGCCCAAGCTCGCGCGGTTTCGCAA
TGAGCTGATCGGCAGCCTGGGCGGCGGCATGGACGGCTTCGGCTGCGGCGAGGGCTTCAATGTCTAG

Upstream 100 bases:

>100_bases
CGCTGCGGCGCCCGAGCCGGCGCCGCCGGTGCCGGCCGCCGGCAGCGGCCTGTCGGCGCTCAAGCGGTTCATCCATTCCA
CCACGAAGCGATCGTAAGCG

Downstream 100 bases:

>100_bases
CGGCGTGCTGTGGGCGCTGTCGTTCGCGCTGCTGCTGGCCGCGGCCGGCGTGATGCTGTGGCGCGGCAGCCAGTTGCGCG
AGCAGAGCGCCCATACGCGG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAHDDIQFADGAAPFSHSQQFHDIKDAAHEHLLNRIEELGSEFGRWSRQAINQFVDLEVDSFVRLRRIPLNESEVREIAE
ALTKELAGFGPIEDLLGDPLVEDILINGYNDIYVSRRGILAKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLP
DGGRVNVVIEPLSLDGPVVSIRKFRKDPLKPSDLLENGTYNDEINTLLKAAVAARCNILVSGGTSSGKTSLLNALAFHVP
ENERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMG
TIHASSPRECLYRLEMLAGFAGFQGTESSLRRQISNAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVATQELYRYDARV
TPEGEEIDHWEALGIHPHSPKLARFRNELIGSLGGGMDGFGCGEGFNV

Sequences:

>Translated_448_residues
MAHDDIQFADGAAPFSHSQQFHDIKDAAHEHLLNRIEELGSEFGRWSRQAINQFVDLEVDSFVRLRRIPLNESEVREIAE
ALTKELAGFGPIEDLLGDPLVEDILINGYNDIYVSRRGILAKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLP
DGGRVNVVIEPLSLDGPVVSIRKFRKDPLKPSDLLENGTYNDEINTLLKAAVAARCNILVSGGTSSGKTSLLNALAFHVP
ENERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMG
TIHASSPRECLYRLEMLAGFAGFQGTESSLRRQISNAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVATQELYRYDARV
TPEGEEIDHWEALGIHPHSPKLARFRNELIGSLGGGMDGFGCGEGFNV
>Mature_447_residues
AHDDIQFADGAAPFSHSQQFHDIKDAAHEHLLNRIEELGSEFGRWSRQAINQFVDLEVDSFVRLRRIPLNESEVREIAEA
LTKELAGFGPIEDLLGDPLVEDILINGYNDIYVSRRGILAKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPD
GGRVNVVIEPLSLDGPVVSIRKFRKDPLKPSDLLENGTYNDEINTLLKAAVAARCNILVSGGTSSGKTSLLNALAFHVPE
NERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVRGGEVLEMLQAMNTGHDGSMGT
IHASSPRECLYRLEMLAGFAGFQGTESSLRRQISNAIDFIVQIGRLSNGRRRILSITEVTGMSDNIVATQELYRYDARVT
PEGEEIDHWEALGIHPHSPKLARFRNELIGSLGGGMDGFGCGEGFNV

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 49569; Mature: 49438

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHDDIQFADGAAPFSHSQQFHDIKDAAHEHLLNRIEELGSEFGRWSRQAINQFVDLEVD
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SFVRLRRIPLNESEVREIAEALTKELAGFGPIEDLLGDPLVEDILINGYNDIYVSRRGIL
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCEEEEECCCCE
AKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDGGRVNVVIEPLSLDGPVVS
EECCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHH
IRKFRKDPLKPSDLLENGTYNDEINTLLKAAVAARCNILVSGGTSSGKTSLLNALAFHVP
HHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCC
ENERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVR
CCCEEEEEECCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
GGEVLEMLQAMNTGHDGSMGTIHASSPRECLYRLEMLAGFAGFQGTESSLRRQISNAIDF
CCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IVQIGRLSNGRRRILSITEVTGMSDNIVATQELYRYDARVTPEGEEIDHWEALGIHPHSP
HHHHHHCCCCCHHEEEEEHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
KLARFRNELIGSLGGGMDGFGCGEGFNV
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHDDIQFADGAAPFSHSQQFHDIKDAAHEHLLNRIEELGSEFGRWSRQAINQFVDLEVD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SFVRLRRIPLNESEVREIAEALTKELAGFGPIEDLLGDPLVEDILINGYNDIYVSRRGIL
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCEEEEECCCCE
AKLPIRFTDNAHLLRIVRRILAPVGRRLDESNPMVDARLPDGGRVNVVIEPLSLDGPVVS
EECCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHH
IRKFRKDPLKPSDLLENGTYNDEINTLLKAAVAARCNILVSGGTSSGKTSLLNALAFHVP
HHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCC
ENERVVTIEDTAELSLNHPHVVRLESRPGGFDGTGVVTIRDLLRNTLRMRPDRIIVGEVR
CCCEEEEEECCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECC
GGEVLEMLQAMNTGHDGSMGTIHASSPRECLYRLEMLAGFAGFQGTESSLRRQISNAIDF
CCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IVQIGRLSNGRRRILSITEVTGMSDNIVATQELYRYDARVTPEGEEIDHWEALGIHPHSP
HHHHHHCCCCCHHEEEEEHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
KLARFRNELIGSLGGGMDGFGCGEGFNV
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]